Gene : Sevir.1G217600 S. viridis v2.1
Defline:  (1 of 2) PTHR23344//PTHR23344:SF29 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // SUBFAMILY NOT NAMED Genomic Order:  2406
Name:  ? Sevir.1G217600 Secondary Identifier:  ? PAC:40608716
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7409 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G217600 0.5kb upstream 0.5kb upstream 5644 true Chr_01: 29186833-29192476 Setaria viridis
Sevir.1G217600 0.5kb upstream 0.5kb upstream 500 false Chr_01: 29186833-29187332 Setaria viridis
Sevir.1G217600 0.5kb downstream 0.5kb downstream 5644 true Chr_01: 29187333-29192976 Setaria viridis
Sevir.1G217600 0.5kb downstream 0.5kb downstream 500 false Chr_01: 29192477-29192976 Setaria viridis
Sevir.1G217600 1.0kb upstream 1.0kb upstream 6144 true Chr_01: 29186333-29192476 Setaria viridis
Sevir.1G217600 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 29186333-29187332 Setaria viridis
Sevir.1G217600 1.0kb downstream 1.0kb downstream 6144 true Chr_01: 29187333-29193476 Setaria viridis
Sevir.1G217600 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 29192477-29193476 Setaria viridis
Sevir.1G217600 2.0kb upstream 2.0kb upstream 7144 true Chr_01: 29185333-29192476 Setaria viridis
Sevir.1G217600 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 29185333-29187332 Setaria viridis
Sevir.1G217600 2.0kb downstream 2.0kb downstream 7144 true Chr_01: 29187333-29194476 Setaria viridis
Sevir.1G217600 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 29192477-29194476 Setaria viridis
Sevir.1G217600 5.0kb upstream 5.0kb upstream 10144 true Chr_01: 29182333-29192476 Setaria viridis
Sevir.1G217600 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 29182333-29187332 Setaria viridis
Sevir.1G217600 5.0kb downstream 5.0kb downstream 10144 true Chr_01: 29187333-29197476 Setaria viridis
Sevir.1G217600 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 29192477-29197476 Setaria viridis
Sevir.1G217600 10.0kb upstream 10.0kb upstream 15144 true Chr_01: 29177333-29192476 Setaria viridis
Sevir.1G217600 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 29177333-29187332 Setaria viridis
Sevir.1G217600 10.0kb downstream 10.0kb downstream 15144 true Chr_01: 29187333-29202476 Setaria viridis
Sevir.1G217600 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 29192477-29202476 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176009 5267 Panicoideae View MSA
124570308 5269 Grass View MSA
122046858 5273 Angiosperm View MSA
121349950 5274 Embryophyte View MSA
123381513 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain