Gene : Sevir.9G198000 S. viridis v2.1
Defline:  (1 of 5) K01873 - valyl-tRNA synthetase (VARS, valS) Genomic Order:  2185
Name:  ? Sevir.9G198000 Secondary Identifier:  ? PAC:40613936
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRNA-CHARGING-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G198000 0.5kb upstream 0.5kb upstream 8558 true Chr_09: 14025268-14033825 Setaria viridis
Sevir.9G198000 0.5kb upstream 0.5kb upstream 500 false Chr_09: 14033326-14033825 Setaria viridis
Sevir.9G198000 0.5kb downstream 0.5kb downstream 8558 true Chr_09: 14024768-14033325 Setaria viridis
Sevir.9G198000 0.5kb downstream 0.5kb downstream 500 false Chr_09: 14024768-14025267 Setaria viridis
Sevir.9G198000 1.0kb upstream 1.0kb upstream 9058 true Chr_09: 14025268-14034325 Setaria viridis
Sevir.9G198000 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 14033326-14034325 Setaria viridis
Sevir.9G198000 1.0kb downstream 1.0kb downstream 9058 true Chr_09: 14024268-14033325 Setaria viridis
Sevir.9G198000 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 14024268-14025267 Setaria viridis
Sevir.9G198000 2.0kb upstream 2.0kb upstream 10058 true Chr_09: 14025268-14035325 Setaria viridis
Sevir.9G198000 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 14033326-14035325 Setaria viridis
Sevir.9G198000 2.0kb downstream 2.0kb downstream 10058 true Chr_09: 14023268-14033325 Setaria viridis
Sevir.9G198000 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 14023268-14025267 Setaria viridis
Sevir.9G198000 5.0kb upstream 5.0kb upstream 13058 true Chr_09: 14025268-14038325 Setaria viridis
Sevir.9G198000 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 14033326-14038325 Setaria viridis
Sevir.9G198000 5.0kb downstream 5.0kb downstream 13058 true Chr_09: 14020268-14033325 Setaria viridis
Sevir.9G198000 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 14020268-14025267 Setaria viridis
Sevir.9G198000 10.0kb upstream 10.0kb upstream 18058 true Chr_09: 14025268-14043325 Setaria viridis
Sevir.9G198000 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 14033326-14043325 Setaria viridis
Sevir.9G198000 10.0kb downstream 10.0kb downstream 18058 true Chr_09: 14015268-14033325 Setaria viridis
Sevir.9G198000 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 14015268-14025267 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191584 5267 Panicoideae View MSA
124590006 5269 Grass View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain