Gene : Sevir.1G324500 S. viridis v2.1
Defline:  (1 of 2) PTHR12526//PTHR12526:SF371 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  3566
Name:  ? Sevir.1G324500 Secondary Identifier:  ? PAC:40605897
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis GLYCOGENSYNTH-PWY Setaria viridis pathologic  
Sviridis PWY-622 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G324500 0.5kb upstream 0.5kb upstream 5300 true Chr_01: 37480706-37486005 Setaria viridis
Sevir.1G324500 0.5kb upstream 0.5kb upstream 500 false Chr_01: 37485506-37486005 Setaria viridis
Sevir.1G324500 0.5kb downstream 0.5kb downstream 5300 true Chr_01: 37480206-37485505 Setaria viridis
Sevir.1G324500 0.5kb downstream 0.5kb downstream 500 false Chr_01: 37480206-37480705 Setaria viridis
Sevir.1G324500 1.0kb upstream 1.0kb upstream 5800 true Chr_01: 37480706-37486505 Setaria viridis
Sevir.1G324500 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 37485506-37486505 Setaria viridis
Sevir.1G324500 1.0kb downstream 1.0kb downstream 5800 true Chr_01: 37479706-37485505 Setaria viridis
Sevir.1G324500 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 37479706-37480705 Setaria viridis
Sevir.1G324500 2.0kb upstream 2.0kb upstream 6800 true Chr_01: 37480706-37487505 Setaria viridis
Sevir.1G324500 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 37485506-37487505 Setaria viridis
Sevir.1G324500 2.0kb downstream 2.0kb downstream 6800 true Chr_01: 37478706-37485505 Setaria viridis
Sevir.1G324500 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 37478706-37480705 Setaria viridis
Sevir.1G324500 5.0kb upstream 5.0kb upstream 9800 true Chr_01: 37480706-37490505 Setaria viridis
Sevir.1G324500 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 37485506-37490505 Setaria viridis
Sevir.1G324500 5.0kb downstream 5.0kb downstream 9800 true Chr_01: 37475706-37485505 Setaria viridis
Sevir.1G324500 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 37475706-37480705 Setaria viridis
Sevir.1G324500 10.0kb upstream 10.0kb upstream 14800 true Chr_01: 37480706-37495505 Setaria viridis
Sevir.1G324500 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 37485506-37495505 Setaria viridis
Sevir.1G324500 10.0kb downstream 10.0kb downstream 14800 true Chr_01: 37470706-37485505 Setaria viridis
Sevir.1G324500 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 37470706-37480705 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194216 5267 Panicoideae View MSA
124572279 5269 Grass View MSA
122042262 5273 Angiosperm View MSA
121347324 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain