Gene : Sevir.1G360800 S. viridis v2.1

Defline:  (1 of 1) PTHR14363//PTHR14363:SF16 - HEPARANASE-RELATED // HEPARANASE-LIKE PROTEIN 3 Genomic Order:  3959
Name:  ? Sevir.1G360800 Secondary Identifier:  ? PAC:40607592

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7213 Setaria viridis pathologic  
Sviridis PWY-7214 Setaria viridis pathologic  
Sviridis PWY-7445 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G360800 0.5kb upstream 0.5kb upstream 4548 true Chr_01: 40162289-40166836 Setaria viridis
Sevir.1G360800 0.5kb upstream 0.5kb upstream 500 false Chr_01: 40162289-40162788 Setaria viridis
Sevir.1G360800 0.5kb downstream 0.5kb downstream 4548 true Chr_01: 40162789-40167336 Setaria viridis
Sevir.1G360800 0.5kb downstream 0.5kb downstream 500 false Chr_01: 40166837-40167336 Setaria viridis
Sevir.1G360800 1.0kb upstream 1.0kb upstream 5048 true Chr_01: 40161789-40166836 Setaria viridis
Sevir.1G360800 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 40161789-40162788 Setaria viridis
Sevir.1G360800 1.0kb downstream 1.0kb downstream 5048 true Chr_01: 40162789-40167836 Setaria viridis
Sevir.1G360800 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 40166837-40167836 Setaria viridis
Sevir.1G360800 2.0kb upstream 2.0kb upstream 6048 true Chr_01: 40160789-40166836 Setaria viridis
Sevir.1G360800 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 40160789-40162788 Setaria viridis
Sevir.1G360800 2.0kb downstream 2.0kb downstream 6048 true Chr_01: 40162789-40168836 Setaria viridis
Sevir.1G360800 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 40166837-40168836 Setaria viridis
Sevir.1G360800 5.0kb upstream 5.0kb upstream 9048 true Chr_01: 40157789-40166836 Setaria viridis
Sevir.1G360800 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 40157789-40162788 Setaria viridis
Sevir.1G360800 5.0kb downstream 5.0kb downstream 9048 true Chr_01: 40162789-40171836 Setaria viridis
Sevir.1G360800 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 40166837-40171836 Setaria viridis
Sevir.1G360800 10.0kb upstream 10.0kb upstream 14048 true Chr_01: 40152789-40166836 Setaria viridis
Sevir.1G360800 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 40152789-40162788 Setaria viridis
Sevir.1G360800 10.0kb downstream 10.0kb downstream 14048 true Chr_01: 40162789-40176836 Setaria viridis
Sevir.1G360800 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 40166837-40176836 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178103 5267 Panicoideae View MSA
124579874 5269 Grass View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain