Gene : Sevir.9G046800 S. viridis v2.1
Defline:  (1 of 1) KOG2822 - Sphingoid base-phosphate phosphatase Genomic Order:  530
Name:  ? Sevir.9G046800 Secondary Identifier:  ? PAC:40617773
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRIGLSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G046800 0.5kb upstream 0.5kb upstream 3843 true Chr_09: 2750621-2754463 Setaria viridis
Sevir.9G046800 0.5kb upstream 0.5kb upstream 500 false Chr_09: 2750621-2751120 Setaria viridis
Sevir.9G046800 0.5kb downstream 0.5kb downstream 3843 true Chr_09: 2751121-2754963 Setaria viridis
Sevir.9G046800 0.5kb downstream 0.5kb downstream 500 false Chr_09: 2754464-2754963 Setaria viridis
Sevir.9G046800 1.0kb upstream 1.0kb upstream 4343 true Chr_09: 2750121-2754463 Setaria viridis
Sevir.9G046800 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 2750121-2751120 Setaria viridis
Sevir.9G046800 1.0kb downstream 1.0kb downstream 4343 true Chr_09: 2751121-2755463 Setaria viridis
Sevir.9G046800 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 2754464-2755463 Setaria viridis
Sevir.9G046800 2.0kb upstream 2.0kb upstream 5343 true Chr_09: 2749121-2754463 Setaria viridis
Sevir.9G046800 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 2749121-2751120 Setaria viridis
Sevir.9G046800 2.0kb downstream 2.0kb downstream 5343 true Chr_09: 2751121-2756463 Setaria viridis
Sevir.9G046800 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 2754464-2756463 Setaria viridis
Sevir.9G046800 5.0kb upstream 5.0kb upstream 8343 true Chr_09: 2746121-2754463 Setaria viridis
Sevir.9G046800 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 2746121-2751120 Setaria viridis
Sevir.9G046800 5.0kb downstream 5.0kb downstream 8343 true Chr_09: 2751121-2759463 Setaria viridis
Sevir.9G046800 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 2754464-2759463 Setaria viridis
Sevir.9G046800 10.0kb upstream 10.0kb upstream 13343 true Chr_09: 2741121-2754463 Setaria viridis
Sevir.9G046800 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 2741121-2751120 Setaria viridis
Sevir.9G046800 10.0kb downstream 10.0kb downstream 13343 true Chr_09: 2751121-2764463 Setaria viridis
Sevir.9G046800 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 2754464-2764463 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197916 5267 Panicoideae View MSA
124580296 5269 Grass View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain