Gene : Sevir.9G046301 S. viridis v2.1
Defline:  (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  525
Name:  ? Sevir.9G046301 Secondary Identifier:  ? PAC:40613680
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5098 Setaria viridis pathologic  
Sviridis PWY-6927 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G046301 0.5kb upstream 0.5kb upstream 2777 true Chr_09: 2727507-2730283 Setaria viridis
Sevir.9G046301 0.5kb upstream 0.5kb upstream 500 false Chr_09: 2729784-2730283 Setaria viridis
Sevir.9G046301 0.5kb downstream 0.5kb downstream 2777 true Chr_09: 2727007-2729783 Setaria viridis
Sevir.9G046301 0.5kb downstream 0.5kb downstream 500 false Chr_09: 2727007-2727506 Setaria viridis
Sevir.9G046301 1.0kb upstream 1.0kb upstream 3277 true Chr_09: 2727507-2730783 Setaria viridis
Sevir.9G046301 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 2729784-2730783 Setaria viridis
Sevir.9G046301 1.0kb downstream 1.0kb downstream 3277 true Chr_09: 2726507-2729783 Setaria viridis
Sevir.9G046301 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 2726507-2727506 Setaria viridis
Sevir.9G046301 2.0kb upstream 2.0kb upstream 4277 true Chr_09: 2727507-2731783 Setaria viridis
Sevir.9G046301 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 2729784-2731783 Setaria viridis
Sevir.9G046301 2.0kb downstream 2.0kb downstream 4277 true Chr_09: 2725507-2729783 Setaria viridis
Sevir.9G046301 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 2725507-2727506 Setaria viridis
Sevir.9G046301 5.0kb upstream 5.0kb upstream 7277 true Chr_09: 2727507-2734783 Setaria viridis
Sevir.9G046301 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 2729784-2734783 Setaria viridis
Sevir.9G046301 5.0kb downstream 5.0kb downstream 7277 true Chr_09: 2722507-2729783 Setaria viridis
Sevir.9G046301 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 2722507-2727506 Setaria viridis
Sevir.9G046301 10.0kb upstream 10.0kb upstream 12277 true Chr_09: 2727507-2739783 Setaria viridis
Sevir.9G046301 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 2729784-2739783 Setaria viridis
Sevir.9G046301 10.0kb downstream 10.0kb downstream 12277 true Chr_09: 2717507-2729783 Setaria viridis
Sevir.9G046301 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 2717507-2727506 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027752 5273 Angiosperm View MSA
122197326 5267 Panicoideae View MSA
124575278 5269 Grass View MSA
123429167 5275 Viridiplantae View MSA
121348668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain