Gene : Sevir.4G283800 S. viridis v2.1
Defline:  (1 of 1) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Genomic Order:  3068
Name:  ? Sevir.4G283800 Secondary Identifier:  ? PAC:40601556
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6829 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G283800 0.5kb upstream 0.5kb upstream 3662 true Chr_04: 38011592-38015253 Setaria viridis
Sevir.4G283800 0.5kb upstream 0.5kb upstream 500 false Chr_04: 38011592-38012091 Setaria viridis
Sevir.4G283800 0.5kb downstream 0.5kb downstream 3662 true Chr_04: 38012092-38015753 Setaria viridis
Sevir.4G283800 0.5kb downstream 0.5kb downstream 500 false Chr_04: 38015254-38015753 Setaria viridis
Sevir.4G283800 1.0kb upstream 1.0kb upstream 4162 true Chr_04: 38011092-38015253 Setaria viridis
Sevir.4G283800 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 38011092-38012091 Setaria viridis
Sevir.4G283800 1.0kb downstream 1.0kb downstream 4162 true Chr_04: 38012092-38016253 Setaria viridis
Sevir.4G283800 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 38015254-38016253 Setaria viridis
Sevir.4G283800 2.0kb upstream 2.0kb upstream 5162 true Chr_04: 38010092-38015253 Setaria viridis
Sevir.4G283800 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 38010092-38012091 Setaria viridis
Sevir.4G283800 2.0kb downstream 2.0kb downstream 5162 true Chr_04: 38012092-38017253 Setaria viridis
Sevir.4G283800 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 38015254-38017253 Setaria viridis
Sevir.4G283800 5.0kb upstream 5.0kb upstream 8162 true Chr_04: 38007092-38015253 Setaria viridis
Sevir.4G283800 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 38007092-38012091 Setaria viridis
Sevir.4G283800 5.0kb downstream 5.0kb downstream 8162 true Chr_04: 38012092-38020253 Setaria viridis
Sevir.4G283800 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 38015254-38020253 Setaria viridis
Sevir.4G283800 10.0kb upstream 10.0kb upstream 13162 true Chr_04: 38002092-38015253 Setaria viridis
Sevir.4G283800 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 38002092-38012091 Setaria viridis
Sevir.4G283800 10.0kb downstream 10.0kb downstream 13162 true Chr_04: 38012092-38025253 Setaria viridis
Sevir.4G283800 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 38015254-38025253 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184350 5267 Panicoideae View MSA
124575975 5269 Grass View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain