Gene : Sevir.4G211100 S. viridis v2.1
Defline:  (1 of 1) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) Genomic Order:  2279
Name:  ? Sevir.4G211100 Secondary Identifier:  ? PAC:40599729
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G211100 0.5kb upstream 0.5kb upstream 1378 true Chr_04: 31265261-31266638 Setaria viridis
Sevir.4G211100 0.5kb upstream 0.5kb upstream 500 false Chr_04: 31266139-31266638 Setaria viridis
Sevir.4G211100 0.5kb downstream 0.5kb downstream 1378 true Chr_04: 31264761-31266138 Setaria viridis
Sevir.4G211100 0.5kb downstream 0.5kb downstream 500 false Chr_04: 31264761-31265260 Setaria viridis
Sevir.4G211100 1.0kb upstream 1.0kb upstream 1878 true Chr_04: 31265261-31267138 Setaria viridis
Sevir.4G211100 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 31266139-31267138 Setaria viridis
Sevir.4G211100 1.0kb downstream 1.0kb downstream 1878 true Chr_04: 31264261-31266138 Setaria viridis
Sevir.4G211100 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 31264261-31265260 Setaria viridis
Sevir.4G211100 2.0kb upstream 2.0kb upstream 2878 true Chr_04: 31265261-31268138 Setaria viridis
Sevir.4G211100 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 31266139-31268138 Setaria viridis
Sevir.4G211100 2.0kb downstream 2.0kb downstream 2878 true Chr_04: 31263261-31266138 Setaria viridis
Sevir.4G211100 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 31263261-31265260 Setaria viridis
Sevir.4G211100 5.0kb upstream 5.0kb upstream 5878 true Chr_04: 31265261-31271138 Setaria viridis
Sevir.4G211100 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 31266139-31271138 Setaria viridis
Sevir.4G211100 5.0kb downstream 5.0kb downstream 5878 true Chr_04: 31260261-31266138 Setaria viridis
Sevir.4G211100 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 31260261-31265260 Setaria viridis
Sevir.4G211100 10.0kb upstream 10.0kb upstream 10878 true Chr_04: 31265261-31276138 Setaria viridis
Sevir.4G211100 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 31266139-31276138 Setaria viridis
Sevir.4G211100 10.0kb downstream 10.0kb downstream 10878 true Chr_04: 31255261-31266138 Setaria viridis
Sevir.4G211100 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 31255261-31265260 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178383 5267 Panicoideae View MSA
124580492 5269 Grass View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain