Gene : Sevir.3G000400 S. viridis v2.1
Defline:  (1 of 50) PF00179 - Ubiquitin-conjugating enzyme (UQ_con) Genomic Order:  4
Name:  ? Sevir.3G000400 Secondary Identifier:  ? PAC:40647732
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G000400 0.5kb upstream 0.5kb upstream 1027 true Chr_03: 52526-53552 Setaria viridis
Sevir.3G000400 0.5kb upstream 0.5kb upstream 500 false Chr_03: 52526-53025 Setaria viridis
Sevir.3G000400 0.5kb downstream 0.5kb downstream 1027 true Chr_03: 53026-54052 Setaria viridis
Sevir.3G000400 0.5kb downstream 0.5kb downstream 500 false Chr_03: 53553-54052 Setaria viridis
Sevir.3G000400 1.0kb upstream 1.0kb upstream 1527 true Chr_03: 52026-53552 Setaria viridis
Sevir.3G000400 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 52026-53025 Setaria viridis
Sevir.3G000400 1.0kb downstream 1.0kb downstream 1527 true Chr_03: 53026-54552 Setaria viridis
Sevir.3G000400 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 53553-54552 Setaria viridis
Sevir.3G000400 2.0kb upstream 2.0kb upstream 2527 true Chr_03: 51026-53552 Setaria viridis
Sevir.3G000400 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 51026-53025 Setaria viridis
Sevir.3G000400 2.0kb downstream 2.0kb downstream 2527 true Chr_03: 53026-55552 Setaria viridis
Sevir.3G000400 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 53553-55552 Setaria viridis
Sevir.3G000400 5.0kb upstream 5.0kb upstream 5527 true Chr_03: 48026-53552 Setaria viridis
Sevir.3G000400 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 48026-53025 Setaria viridis
Sevir.3G000400 5.0kb downstream 5.0kb downstream 5527 true Chr_03: 53026-58552 Setaria viridis
Sevir.3G000400 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 53553-58552 Setaria viridis
Sevir.3G000400 10.0kb upstream 10.0kb upstream 10527 true Chr_03: 43026-53552 Setaria viridis
Sevir.3G000400 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 43026-53025 Setaria viridis
Sevir.3G000400 10.0kb downstream 10.0kb downstream 10527 true Chr_03: 53026-63552 Setaria viridis
Sevir.3G000400 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 53553-63552 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029071 5273 Angiosperm View MSA
122118126 5267 Panicoideae View MSA
124411989 5269 Grass View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain