Gene : Sevir.3G046000 S. viridis v2.1
Defline:  (1 of 1) PTHR11254//PTHR11254:SF327 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Genomic Order:  510
Name:  ? Sevir.3G046000 Secondary Identifier:  ? PAC:40646210
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G046000 0.5kb upstream 0.5kb upstream 6464 true Chr_03: 2880222-2886685 Setaria viridis
Sevir.3G046000 0.5kb upstream 0.5kb upstream 500 false Chr_03: 2880222-2880721 Setaria viridis
Sevir.3G046000 0.5kb downstream 0.5kb downstream 6464 true Chr_03: 2880722-2887185 Setaria viridis
Sevir.3G046000 0.5kb downstream 0.5kb downstream 500 false Chr_03: 2886686-2887185 Setaria viridis
Sevir.3G046000 1.0kb upstream 1.0kb upstream 6964 true Chr_03: 2879722-2886685 Setaria viridis
Sevir.3G046000 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 2879722-2880721 Setaria viridis
Sevir.3G046000 1.0kb downstream 1.0kb downstream 6964 true Chr_03: 2880722-2887685 Setaria viridis
Sevir.3G046000 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 2886686-2887685 Setaria viridis
Sevir.3G046000 2.0kb upstream 2.0kb upstream 7964 true Chr_03: 2878722-2886685 Setaria viridis
Sevir.3G046000 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 2878722-2880721 Setaria viridis
Sevir.3G046000 2.0kb downstream 2.0kb downstream 7964 true Chr_03: 2880722-2888685 Setaria viridis
Sevir.3G046000 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 2886686-2888685 Setaria viridis
Sevir.3G046000 5.0kb upstream 5.0kb upstream 10964 true Chr_03: 2875722-2886685 Setaria viridis
Sevir.3G046000 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 2875722-2880721 Setaria viridis
Sevir.3G046000 5.0kb downstream 5.0kb downstream 10964 true Chr_03: 2880722-2891685 Setaria viridis
Sevir.3G046000 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 2886686-2891685 Setaria viridis
Sevir.3G046000 10.0kb upstream 10.0kb upstream 15964 true Chr_03: 2870722-2886685 Setaria viridis
Sevir.3G046000 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 2870722-2880721 Setaria viridis
Sevir.3G046000 10.0kb downstream 10.0kb downstream 15964 true Chr_03: 2880722-2896685 Setaria viridis
Sevir.3G046000 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 2886686-2896685 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188896 5267 Panicoideae View MSA
124574381 5269 Grass View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain