Gene : Sevir.4G115500 S. viridis v2.1
Defline:  (1 of 1) PTHR11353//PTHR11353:SF103 - CHAPERONIN // SUBFAMILY NOT NAMED Genomic Order:  1279
Name:  ? Sevir.4G115500 Secondary Identifier:  ? PAC:40599901
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6352 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G115500 0.5kb upstream 0.5kb upstream 8358 true Chr_04: 10845076-10853433 Setaria viridis
Sevir.4G115500 0.5kb upstream 0.5kb upstream 500 false Chr_04: 10852934-10853433 Setaria viridis
Sevir.4G115500 0.5kb downstream 0.5kb downstream 8358 true Chr_04: 10844576-10852933 Setaria viridis
Sevir.4G115500 0.5kb downstream 0.5kb downstream 500 false Chr_04: 10844576-10845075 Setaria viridis
Sevir.4G115500 1.0kb upstream 1.0kb upstream 8858 true Chr_04: 10845076-10853933 Setaria viridis
Sevir.4G115500 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 10852934-10853933 Setaria viridis
Sevir.4G115500 1.0kb downstream 1.0kb downstream 8858 true Chr_04: 10844076-10852933 Setaria viridis
Sevir.4G115500 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 10844076-10845075 Setaria viridis
Sevir.4G115500 2.0kb upstream 2.0kb upstream 9858 true Chr_04: 10845076-10854933 Setaria viridis
Sevir.4G115500 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 10852934-10854933 Setaria viridis
Sevir.4G115500 2.0kb downstream 2.0kb downstream 9858 true Chr_04: 10843076-10852933 Setaria viridis
Sevir.4G115500 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 10843076-10845075 Setaria viridis
Sevir.4G115500 5.0kb upstream 5.0kb upstream 12858 true Chr_04: 10845076-10857933 Setaria viridis
Sevir.4G115500 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 10852934-10857933 Setaria viridis
Sevir.4G115500 5.0kb downstream 5.0kb downstream 12858 true Chr_04: 10840076-10852933 Setaria viridis
Sevir.4G115500 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 10840076-10845075 Setaria viridis
Sevir.4G115500 10.0kb upstream 10.0kb upstream 17858 true Chr_04: 10845076-10862933 Setaria viridis
Sevir.4G115500 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 10852934-10862933 Setaria viridis
Sevir.4G115500 10.0kb downstream 10.0kb downstream 17858 true Chr_04: 10835076-10852933 Setaria viridis
Sevir.4G115500 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 10835076-10845075 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028209 5273 Angiosperm View MSA
122177020 5267 Panicoideae View MSA
124583540 5269 Grass View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain