Gene : Sevir.3G187800 S. viridis v2.1
Defline:  (1 of 1) PTHR10949//PTHR10949:SF14 - LIPOYL SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2026
Name:  ? Sevir.3G187800 Secondary Identifier:  ? PAC:40647184
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY0-501 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G187800 0.5kb upstream 0.5kb upstream 3444 true Chr_03: 13455764-13459207 Setaria viridis
Sevir.3G187800 0.5kb upstream 0.5kb upstream 500 false Chr_03: 13455764-13456263 Setaria viridis
Sevir.3G187800 0.5kb downstream 0.5kb downstream 3444 true Chr_03: 13456264-13459707 Setaria viridis
Sevir.3G187800 0.5kb downstream 0.5kb downstream 500 false Chr_03: 13459208-13459707 Setaria viridis
Sevir.3G187800 1.0kb upstream 1.0kb upstream 3944 true Chr_03: 13455264-13459207 Setaria viridis
Sevir.3G187800 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 13455264-13456263 Setaria viridis
Sevir.3G187800 1.0kb downstream 1.0kb downstream 3944 true Chr_03: 13456264-13460207 Setaria viridis
Sevir.3G187800 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 13459208-13460207 Setaria viridis
Sevir.3G187800 2.0kb upstream 2.0kb upstream 4944 true Chr_03: 13454264-13459207 Setaria viridis
Sevir.3G187800 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 13454264-13456263 Setaria viridis
Sevir.3G187800 2.0kb downstream 2.0kb downstream 4944 true Chr_03: 13456264-13461207 Setaria viridis
Sevir.3G187800 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 13459208-13461207 Setaria viridis
Sevir.3G187800 5.0kb upstream 5.0kb upstream 7944 true Chr_03: 13451264-13459207 Setaria viridis
Sevir.3G187800 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 13451264-13456263 Setaria viridis
Sevir.3G187800 5.0kb downstream 5.0kb downstream 7944 true Chr_03: 13456264-13464207 Setaria viridis
Sevir.3G187800 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 13459208-13464207 Setaria viridis
Sevir.3G187800 10.0kb upstream 10.0kb upstream 12944 true Chr_03: 13446264-13459207 Setaria viridis
Sevir.3G187800 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 13446264-13456263 Setaria viridis
Sevir.3G187800 10.0kb downstream 10.0kb downstream 12944 true Chr_03: 13456264-13469207 Setaria viridis
Sevir.3G187800 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 13459208-13469207 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041417 5273 Angiosperm View MSA
122175554 5267 Panicoideae View MSA
124590152 5269 Grass View MSA
121346374 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain