Gene : Sevir.4G038000 S. viridis v2.1
Defline:  (1 of 2) PTHR11712//PTHR11712:SF286 - POLYKETIDE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  434
Name:  ? Sevir.4G038000 Secondary Identifier:  ? PAC:40599824
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis FASYN-ELONG-PWY Setaria viridis pathologic  
Sviridis PWY-5156 Setaria viridis pathologic  
Sviridis PWY-5971 Setaria viridis pathologic  
Sviridis PWY-5989 Setaria viridis pathologic  
Sviridis PWY-6282 Setaria viridis pathologic  
Sviridis PWY-7388 Setaria viridis pathologic  
Sviridis PWY-7663 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G038000 0.5kb upstream 0.5kb upstream 4804 true Chr_04: 2697971-2702774 Setaria viridis
Sevir.4G038000 0.5kb upstream 0.5kb upstream 500 false Chr_04: 2697971-2698470 Setaria viridis
Sevir.4G038000 0.5kb downstream 0.5kb downstream 4804 true Chr_04: 2698471-2703274 Setaria viridis
Sevir.4G038000 0.5kb downstream 0.5kb downstream 500 false Chr_04: 2702775-2703274 Setaria viridis
Sevir.4G038000 1.0kb upstream 1.0kb upstream 5304 true Chr_04: 2697471-2702774 Setaria viridis
Sevir.4G038000 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 2697471-2698470 Setaria viridis
Sevir.4G038000 1.0kb downstream 1.0kb downstream 5304 true Chr_04: 2698471-2703774 Setaria viridis
Sevir.4G038000 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 2702775-2703774 Setaria viridis
Sevir.4G038000 2.0kb upstream 2.0kb upstream 6304 true Chr_04: 2696471-2702774 Setaria viridis
Sevir.4G038000 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 2696471-2698470 Setaria viridis
Sevir.4G038000 2.0kb downstream 2.0kb downstream 6304 true Chr_04: 2698471-2704774 Setaria viridis
Sevir.4G038000 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 2702775-2704774 Setaria viridis
Sevir.4G038000 5.0kb upstream 5.0kb upstream 9304 true Chr_04: 2693471-2702774 Setaria viridis
Sevir.4G038000 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 2693471-2698470 Setaria viridis
Sevir.4G038000 5.0kb downstream 5.0kb downstream 9304 true Chr_04: 2698471-2707774 Setaria viridis
Sevir.4G038000 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 2702775-2707774 Setaria viridis
Sevir.4G038000 10.0kb upstream 10.0kb upstream 14304 true Chr_04: 2688471-2702774 Setaria viridis
Sevir.4G038000 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 2688471-2698470 Setaria viridis
Sevir.4G038000 10.0kb downstream 10.0kb downstream 14304 true Chr_04: 2698471-2712774 Setaria viridis
Sevir.4G038000 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 2702775-2712774 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196973 5267 Panicoideae View MSA
124574640 5269 Grass View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain