Gene : Sevir.3G381900 S. viridis v2.1
Defline:  (1 of 2) PTHR14363//PTHR14363:SF19 - HEPARANASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4108
Name:  ? Sevir.3G381900 Secondary Identifier:  ? PAC:40650371
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7213 Setaria viridis pathologic  
Sviridis PWY-7214 Setaria viridis pathologic  
Sviridis PWY-7445 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G381900 0.5kb upstream 0.5kb upstream 5728 true Chr_03: 46370919-46376646 Setaria viridis
Sevir.3G381900 0.5kb upstream 0.5kb upstream 500 false Chr_03: 46370919-46371418 Setaria viridis
Sevir.3G381900 0.5kb downstream 0.5kb downstream 5728 true Chr_03: 46371419-46377146 Setaria viridis
Sevir.3G381900 0.5kb downstream 0.5kb downstream 500 false Chr_03: 46376647-46377146 Setaria viridis
Sevir.3G381900 1.0kb upstream 1.0kb upstream 6228 true Chr_03: 46370419-46376646 Setaria viridis
Sevir.3G381900 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 46370419-46371418 Setaria viridis
Sevir.3G381900 1.0kb downstream 1.0kb downstream 6228 true Chr_03: 46371419-46377646 Setaria viridis
Sevir.3G381900 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 46376647-46377646 Setaria viridis
Sevir.3G381900 2.0kb upstream 2.0kb upstream 7228 true Chr_03: 46369419-46376646 Setaria viridis
Sevir.3G381900 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 46369419-46371418 Setaria viridis
Sevir.3G381900 2.0kb downstream 2.0kb downstream 7228 true Chr_03: 46371419-46378646 Setaria viridis
Sevir.3G381900 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 46376647-46378646 Setaria viridis
Sevir.3G381900 5.0kb upstream 5.0kb upstream 10228 true Chr_03: 46366419-46376646 Setaria viridis
Sevir.3G381900 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 46366419-46371418 Setaria viridis
Sevir.3G381900 5.0kb downstream 5.0kb downstream 10228 true Chr_03: 46371419-46381646 Setaria viridis
Sevir.3G381900 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 46376647-46381646 Setaria viridis
Sevir.3G381900 10.0kb upstream 10.0kb upstream 15228 true Chr_03: 46361419-46376646 Setaria viridis
Sevir.3G381900 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 46361419-46371418 Setaria viridis
Sevir.3G381900 10.0kb downstream 10.0kb downstream 15228 true Chr_03: 46371419-46386646 Setaria viridis
Sevir.3G381900 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 46376647-46386646 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191308 5267 Panicoideae View MSA
124576605 5269 Grass View MSA
122049598 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain