Gene : Sevir.3G392100 S. viridis v2.1
Defline:  (1 of 1) 4.1.1.20 - Diaminopimelate decarboxylase / Meso-2,6-diaminoheptanedioate carboxy-lyase Genomic Order:  4220
Name:  ? Sevir.3G392100 Secondary Identifier:  ? PAC:40650985
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5097 Setaria viridis pathologic  
Sviridis PWY-724 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G392100 0.5kb upstream 0.5kb upstream 5429 true Chr_03: 47305388-47310816 Setaria viridis
Sevir.3G392100 0.5kb upstream 0.5kb upstream 500 false Chr_03: 47310317-47310816 Setaria viridis
Sevir.3G392100 0.5kb downstream 0.5kb downstream 5429 true Chr_03: 47304888-47310316 Setaria viridis
Sevir.3G392100 0.5kb downstream 0.5kb downstream 500 false Chr_03: 47304888-47305387 Setaria viridis
Sevir.3G392100 1.0kb upstream 1.0kb upstream 5929 true Chr_03: 47305388-47311316 Setaria viridis
Sevir.3G392100 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 47310317-47311316 Setaria viridis
Sevir.3G392100 1.0kb downstream 1.0kb downstream 5929 true Chr_03: 47304388-47310316 Setaria viridis
Sevir.3G392100 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 47304388-47305387 Setaria viridis
Sevir.3G392100 2.0kb upstream 2.0kb upstream 6929 true Chr_03: 47305388-47312316 Setaria viridis
Sevir.3G392100 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 47310317-47312316 Setaria viridis
Sevir.3G392100 2.0kb downstream 2.0kb downstream 6929 true Chr_03: 47303388-47310316 Setaria viridis
Sevir.3G392100 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 47303388-47305387 Setaria viridis
Sevir.3G392100 5.0kb upstream 5.0kb upstream 9929 true Chr_03: 47305388-47315316 Setaria viridis
Sevir.3G392100 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 47310317-47315316 Setaria viridis
Sevir.3G392100 5.0kb downstream 5.0kb downstream 9929 true Chr_03: 47300388-47310316 Setaria viridis
Sevir.3G392100 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 47300388-47305387 Setaria viridis
Sevir.3G392100 10.0kb upstream 10.0kb upstream 14929 true Chr_03: 47305388-47320316 Setaria viridis
Sevir.3G392100 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 47310317-47320316 Setaria viridis
Sevir.3G392100 10.0kb downstream 10.0kb downstream 14929 true Chr_03: 47295388-47310316 Setaria viridis
Sevir.3G392100 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 47295388-47305387 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193306 5267 Panicoideae View MSA
124571113 5269 Grass View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain