Gene : Sevir.3G255800 S. viridis v2.1
Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  2755
Name:  ? Sevir.3G255800 Secondary Identifier:  ? PAC:40647335
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis HISTSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G255800 0.5kb upstream 0.5kb upstream 6160 true Chr_03: 20450475-20456634 Setaria viridis
Sevir.3G255800 0.5kb upstream 0.5kb upstream 500 false Chr_03: 20456135-20456634 Setaria viridis
Sevir.3G255800 0.5kb downstream 0.5kb downstream 6160 true Chr_03: 20449975-20456134 Setaria viridis
Sevir.3G255800 0.5kb downstream 0.5kb downstream 500 false Chr_03: 20449975-20450474 Setaria viridis
Sevir.3G255800 1.0kb upstream 1.0kb upstream 6660 true Chr_03: 20450475-20457134 Setaria viridis
Sevir.3G255800 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 20456135-20457134 Setaria viridis
Sevir.3G255800 1.0kb downstream 1.0kb downstream 6660 true Chr_03: 20449475-20456134 Setaria viridis
Sevir.3G255800 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 20449475-20450474 Setaria viridis
Sevir.3G255800 2.0kb upstream 2.0kb upstream 7660 true Chr_03: 20450475-20458134 Setaria viridis
Sevir.3G255800 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 20456135-20458134 Setaria viridis
Sevir.3G255800 2.0kb downstream 2.0kb downstream 7660 true Chr_03: 20448475-20456134 Setaria viridis
Sevir.3G255800 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 20448475-20450474 Setaria viridis
Sevir.3G255800 5.0kb upstream 5.0kb upstream 10660 true Chr_03: 20450475-20461134 Setaria viridis
Sevir.3G255800 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 20456135-20461134 Setaria viridis
Sevir.3G255800 5.0kb downstream 5.0kb downstream 10660 true Chr_03: 20445475-20456134 Setaria viridis
Sevir.3G255800 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 20445475-20450474 Setaria viridis
Sevir.3G255800 10.0kb upstream 10.0kb upstream 15660 true Chr_03: 20450475-20466134 Setaria viridis
Sevir.3G255800 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 20456135-20466134 Setaria viridis
Sevir.3G255800 10.0kb downstream 10.0kb downstream 15660 true Chr_03: 20440475-20456134 Setaria viridis
Sevir.3G255800 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 20440475-20450474 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122194677 5267 Panicoideae View MSA
124584289 5269 Grass View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain