Gene : Sevir.3G276100 S. viridis v2.1
Defline:  (1 of 5) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  2970
Name:  ? Sevir.3G276100 Secondary Identifier:  ? PAC:40648065
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis CALVIN-PWY Setaria viridis pathologic  
Sviridis PHOTOALL-PWY Setaria viridis pathologic  
Sviridis PWY-5723 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G276100 0.5kb upstream 0.5kb upstream 1619 true Chr_03: 23005982-23007600 Setaria viridis
Sevir.3G276100 0.5kb upstream 0.5kb upstream 500 false Chr_03: 23005982-23006481 Setaria viridis
Sevir.3G276100 0.5kb downstream 0.5kb downstream 1619 true Chr_03: 23006482-23008100 Setaria viridis
Sevir.3G276100 0.5kb downstream 0.5kb downstream 500 false Chr_03: 23007601-23008100 Setaria viridis
Sevir.3G276100 1.0kb upstream 1.0kb upstream 2119 true Chr_03: 23005482-23007600 Setaria viridis
Sevir.3G276100 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 23005482-23006481 Setaria viridis
Sevir.3G276100 1.0kb downstream 1.0kb downstream 2119 true Chr_03: 23006482-23008600 Setaria viridis
Sevir.3G276100 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 23007601-23008600 Setaria viridis
Sevir.3G276100 2.0kb upstream 2.0kb upstream 3119 true Chr_03: 23004482-23007600 Setaria viridis
Sevir.3G276100 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 23004482-23006481 Setaria viridis
Sevir.3G276100 2.0kb downstream 2.0kb downstream 3119 true Chr_03: 23006482-23009600 Setaria viridis
Sevir.3G276100 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 23007601-23009600 Setaria viridis
Sevir.3G276100 5.0kb upstream 5.0kb upstream 6119 true Chr_03: 23001482-23007600 Setaria viridis
Sevir.3G276100 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 23001482-23006481 Setaria viridis
Sevir.3G276100 5.0kb downstream 5.0kb downstream 6119 true Chr_03: 23006482-23012600 Setaria viridis
Sevir.3G276100 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 23007601-23012600 Setaria viridis
Sevir.3G276100 10.0kb upstream 10.0kb upstream 11119 true Chr_03: 22996482-23007600 Setaria viridis
Sevir.3G276100 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 22996482-23006481 Setaria viridis
Sevir.3G276100 10.0kb downstream 10.0kb downstream 11119 true Chr_03: 23006482-23017600 Setaria viridis
Sevir.3G276100 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 23007601-23017600 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199516 5267 Panicoideae View MSA
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain