Gene : Sevir.3G413500 S. viridis v2.1
Defline:  (1 of 2) 4.1.1.33 - Diphosphomevalonate decarboxylase / Mevalonate pyrophosphate decarboxylase Genomic Order:  4454
Name:  ? Sevir.3G413500 Secondary Identifier:  ? PAC:40646006
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5910 Setaria viridis pathologic  
Sviridis PWY-922 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G413500 0.5kb upstream 0.5kb upstream 4586 true Chr_03: 49294976-49299561 Setaria viridis
Sevir.3G413500 0.5kb upstream 0.5kb upstream 500 false Chr_03: 49294976-49295475 Setaria viridis
Sevir.3G413500 0.5kb downstream 0.5kb downstream 4586 true Chr_03: 49295476-49300061 Setaria viridis
Sevir.3G413500 0.5kb downstream 0.5kb downstream 500 false Chr_03: 49299562-49300061 Setaria viridis
Sevir.3G413500 1.0kb upstream 1.0kb upstream 5086 true Chr_03: 49294476-49299561 Setaria viridis
Sevir.3G413500 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 49294476-49295475 Setaria viridis
Sevir.3G413500 1.0kb downstream 1.0kb downstream 5086 true Chr_03: 49295476-49300561 Setaria viridis
Sevir.3G413500 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 49299562-49300561 Setaria viridis
Sevir.3G413500 2.0kb upstream 2.0kb upstream 6086 true Chr_03: 49293476-49299561 Setaria viridis
Sevir.3G413500 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 49293476-49295475 Setaria viridis
Sevir.3G413500 2.0kb downstream 2.0kb downstream 6086 true Chr_03: 49295476-49301561 Setaria viridis
Sevir.3G413500 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 49299562-49301561 Setaria viridis
Sevir.3G413500 5.0kb upstream 5.0kb upstream 9086 true Chr_03: 49290476-49299561 Setaria viridis
Sevir.3G413500 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 49290476-49295475 Setaria viridis
Sevir.3G413500 5.0kb downstream 5.0kb downstream 9086 true Chr_03: 49295476-49304561 Setaria viridis
Sevir.3G413500 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 49299562-49304561 Setaria viridis
Sevir.3G413500 10.0kb upstream 10.0kb upstream 14086 true Chr_03: 49285476-49299561 Setaria viridis
Sevir.3G413500 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 49285476-49295475 Setaria viridis
Sevir.3G413500 10.0kb downstream 10.0kb downstream 14086 true Chr_03: 49295476-49309561 Setaria viridis
Sevir.3G413500 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 49299562-49309561 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
122177408 5267 Panicoideae View MSA
124575988 5269 Grass View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain