Gene : Sevir.3G422200 S. viridis v2.1
Defline:  (1 of 1) PTHR11088//PTHR11088:SF31 - TRNA DELTA 2 -ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED // TRNA DIMETHYLALLYLTRANSFERASE 9 Genomic Order:  4553
Name:  ? Sevir.3G422200 Secondary Identifier:  ? PAC:40646401
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-2781 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G422200 0.5kb upstream 0.5kb upstream 2887 true Chr_03: 49975626-49978512 Setaria viridis
Sevir.3G422200 0.5kb upstream 0.5kb upstream 500 false Chr_03: 49975626-49976125 Setaria viridis
Sevir.3G422200 0.5kb downstream 0.5kb downstream 2887 true Chr_03: 49976126-49979012 Setaria viridis
Sevir.3G422200 0.5kb downstream 0.5kb downstream 500 false Chr_03: 49978513-49979012 Setaria viridis
Sevir.3G422200 1.0kb upstream 1.0kb upstream 3387 true Chr_03: 49975126-49978512 Setaria viridis
Sevir.3G422200 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 49975126-49976125 Setaria viridis
Sevir.3G422200 1.0kb downstream 1.0kb downstream 3387 true Chr_03: 49976126-49979512 Setaria viridis
Sevir.3G422200 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 49978513-49979512 Setaria viridis
Sevir.3G422200 2.0kb upstream 2.0kb upstream 4387 true Chr_03: 49974126-49978512 Setaria viridis
Sevir.3G422200 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 49974126-49976125 Setaria viridis
Sevir.3G422200 2.0kb downstream 2.0kb downstream 4387 true Chr_03: 49976126-49980512 Setaria viridis
Sevir.3G422200 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 49978513-49980512 Setaria viridis
Sevir.3G422200 5.0kb upstream 5.0kb upstream 7387 true Chr_03: 49971126-49978512 Setaria viridis
Sevir.3G422200 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 49971126-49976125 Setaria viridis
Sevir.3G422200 5.0kb downstream 5.0kb downstream 7387 true Chr_03: 49976126-49983512 Setaria viridis
Sevir.3G422200 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 49978513-49983512 Setaria viridis
Sevir.3G422200 10.0kb upstream 10.0kb upstream 12387 true Chr_03: 49966126-49978512 Setaria viridis
Sevir.3G422200 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 49966126-49976125 Setaria viridis
Sevir.3G422200 10.0kb downstream 10.0kb downstream 12387 true Chr_03: 49976126-49988512 Setaria viridis
Sevir.3G422200 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 49978513-49988512 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194724 5267 Panicoideae View MSA
124575228 5269 Grass View MSA
122047791 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain