Gene : Sevir.8G097500 S. viridis v2.1
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  1091
Name:  ? Sevir.8G097500 Secondary Identifier:  ? PAC:40639324
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-4361 Setaria viridis pathologic  
Sviridis PWY-7270 Setaria viridis pathologic  
Sviridis PWY-7528 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.8G097500 0.5kb upstream 0.5kb upstream 5304 true Chr_08: 11846440-11851743 Setaria viridis
Sevir.8G097500 0.5kb upstream 0.5kb upstream 500 false Chr_08: 11851244-11851743 Setaria viridis
Sevir.8G097500 0.5kb downstream 0.5kb downstream 5304 true Chr_08: 11845940-11851243 Setaria viridis
Sevir.8G097500 0.5kb downstream 0.5kb downstream 500 false Chr_08: 11845940-11846439 Setaria viridis
Sevir.8G097500 1.0kb upstream 1.0kb upstream 5804 true Chr_08: 11846440-11852243 Setaria viridis
Sevir.8G097500 1.0kb upstream 1.0kb upstream 1000 false Chr_08: 11851244-11852243 Setaria viridis
Sevir.8G097500 1.0kb downstream 1.0kb downstream 5804 true Chr_08: 11845440-11851243 Setaria viridis
Sevir.8G097500 1.0kb downstream 1.0kb downstream 1000 false Chr_08: 11845440-11846439 Setaria viridis
Sevir.8G097500 2.0kb upstream 2.0kb upstream 6804 true Chr_08: 11846440-11853243 Setaria viridis
Sevir.8G097500 2.0kb upstream 2.0kb upstream 2000 false Chr_08: 11851244-11853243 Setaria viridis
Sevir.8G097500 2.0kb downstream 2.0kb downstream 6804 true Chr_08: 11844440-11851243 Setaria viridis
Sevir.8G097500 2.0kb downstream 2.0kb downstream 2000 false Chr_08: 11844440-11846439 Setaria viridis
Sevir.8G097500 5.0kb upstream 5.0kb upstream 9804 true Chr_08: 11846440-11856243 Setaria viridis
Sevir.8G097500 5.0kb upstream 5.0kb upstream 5000 false Chr_08: 11851244-11856243 Setaria viridis
Sevir.8G097500 5.0kb downstream 5.0kb downstream 9804 true Chr_08: 11841440-11851243 Setaria viridis
Sevir.8G097500 5.0kb downstream 5.0kb downstream 5000 false Chr_08: 11841440-11846439 Setaria viridis
Sevir.8G097500 10.0kb upstream 10.0kb upstream 14804 true Chr_08: 11846440-11861243 Setaria viridis
Sevir.8G097500 10.0kb upstream 10.0kb upstream 10000 false Chr_08: 11851244-11861243 Setaria viridis
Sevir.8G097500 10.0kb downstream 10.0kb downstream 14804 true Chr_08: 11836440-11851243 Setaria viridis
Sevir.8G097500 10.0kb downstream 10.0kb downstream 10000 false Chr_08: 11836440-11846439 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189674 5267 Panicoideae View MSA
124569280 5269 Grass View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain