Gene : Sevir.6G056350 S. viridis v2.1

Defline:  (1 of 1) K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) Genomic Order:  668
Name:  ? Sevir.6G056350 Secondary Identifier:  ? PAC:40619440

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G056350 0.5kb upstream 0.5kb upstream 6442 true Chr_06: 4905748-4912189 Setaria viridis
Sevir.6G056350 0.5kb upstream 0.5kb upstream 500 false Chr_06: 4911690-4912189 Setaria viridis
Sevir.6G056350 0.5kb downstream 0.5kb downstream 6442 true Chr_06: 4905248-4911689 Setaria viridis
Sevir.6G056350 0.5kb downstream 0.5kb downstream 500 false Chr_06: 4905248-4905747 Setaria viridis
Sevir.6G056350 1.0kb upstream 1.0kb upstream 6942 true Chr_06: 4905748-4912689 Setaria viridis
Sevir.6G056350 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 4911690-4912689 Setaria viridis
Sevir.6G056350 1.0kb downstream 1.0kb downstream 6942 true Chr_06: 4904748-4911689 Setaria viridis
Sevir.6G056350 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 4904748-4905747 Setaria viridis
Sevir.6G056350 2.0kb upstream 2.0kb upstream 7942 true Chr_06: 4905748-4913689 Setaria viridis
Sevir.6G056350 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 4911690-4913689 Setaria viridis
Sevir.6G056350 2.0kb downstream 2.0kb downstream 7942 true Chr_06: 4903748-4911689 Setaria viridis
Sevir.6G056350 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 4903748-4905747 Setaria viridis
Sevir.6G056350 5.0kb upstream 5.0kb upstream 10942 true Chr_06: 4905748-4916689 Setaria viridis
Sevir.6G056350 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 4911690-4916689 Setaria viridis
Sevir.6G056350 5.0kb downstream 5.0kb downstream 10942 true Chr_06: 4900748-4911689 Setaria viridis
Sevir.6G056350 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 4900748-4905747 Setaria viridis
Sevir.6G056350 10.0kb upstream 10.0kb upstream 15942 true Chr_06: 4905748-4921689 Setaria viridis
Sevir.6G056350 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 4911690-4921689 Setaria viridis
Sevir.6G056350 10.0kb downstream 10.0kb downstream 15942 true Chr_06: 4895748-4911689 Setaria viridis
Sevir.6G056350 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 4895748-4905747 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193782 5267 Panicoideae View MSA
124581049 5269 Grass View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain