Gene : Sevir.6G104900 S. viridis v2.1
Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  1132
Name:  ? Sevir.6G104900 Secondary Identifier:  ? PAC:40619685
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY0-162 Setaria viridis pathologic  
Sviridis PWY-5686 Setaria viridis pathologic  
Sviridis PWY-7211 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G104900 0.5kb upstream 0.5kb upstream 4666 true Chr_06: 10892677-10897342 Setaria viridis
Sevir.6G104900 0.5kb upstream 0.5kb upstream 500 false Chr_06: 10892677-10893176 Setaria viridis
Sevir.6G104900 0.5kb downstream 0.5kb downstream 4666 true Chr_06: 10893177-10897842 Setaria viridis
Sevir.6G104900 0.5kb downstream 0.5kb downstream 500 false Chr_06: 10897343-10897842 Setaria viridis
Sevir.6G104900 1.0kb upstream 1.0kb upstream 5166 true Chr_06: 10892177-10897342 Setaria viridis
Sevir.6G104900 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 10892177-10893176 Setaria viridis
Sevir.6G104900 1.0kb downstream 1.0kb downstream 5166 true Chr_06: 10893177-10898342 Setaria viridis
Sevir.6G104900 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 10897343-10898342 Setaria viridis
Sevir.6G104900 2.0kb upstream 2.0kb upstream 6166 true Chr_06: 10891177-10897342 Setaria viridis
Sevir.6G104900 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 10891177-10893176 Setaria viridis
Sevir.6G104900 2.0kb downstream 2.0kb downstream 6166 true Chr_06: 10893177-10899342 Setaria viridis
Sevir.6G104900 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 10897343-10899342 Setaria viridis
Sevir.6G104900 5.0kb upstream 5.0kb upstream 9166 true Chr_06: 10888177-10897342 Setaria viridis
Sevir.6G104900 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 10888177-10893176 Setaria viridis
Sevir.6G104900 5.0kb downstream 5.0kb downstream 9166 true Chr_06: 10893177-10902342 Setaria viridis
Sevir.6G104900 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 10897343-10902342 Setaria viridis
Sevir.6G104900 10.0kb upstream 10.0kb upstream 14166 true Chr_06: 10883177-10897342 Setaria viridis
Sevir.6G104900 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 10883177-10893176 Setaria viridis
Sevir.6G104900 10.0kb downstream 10.0kb downstream 14166 true Chr_06: 10893177-10907342 Setaria viridis
Sevir.6G104900 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 10897343-10907342 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191667 5267 Panicoideae View MSA
124577983 5269 Grass View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain