Gene : Sevir.6G195000 S. viridis v2.1
Defline:  (1 of 2) 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase Genomic Order:  2174
Name:  ? Sevir.6G195000 Secondary Identifier:  ? PAC:40618478
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6829 Setaria viridis pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G195000 0.5kb upstream 0.5kb upstream 10575 true Chr_06: 31542263-31552837 Setaria viridis
Sevir.6G195000 0.5kb upstream 0.5kb upstream 500 false Chr_06: 31552338-31552837 Setaria viridis
Sevir.6G195000 0.5kb downstream 0.5kb downstream 10575 true Chr_06: 31541763-31552337 Setaria viridis
Sevir.6G195000 0.5kb downstream 0.5kb downstream 500 false Chr_06: 31541763-31542262 Setaria viridis
Sevir.6G195000 1.0kb upstream 1.0kb upstream 11075 true Chr_06: 31542263-31553337 Setaria viridis
Sevir.6G195000 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 31552338-31553337 Setaria viridis
Sevir.6G195000 1.0kb downstream 1.0kb downstream 11075 true Chr_06: 31541263-31552337 Setaria viridis
Sevir.6G195000 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 31541263-31542262 Setaria viridis
Sevir.6G195000 2.0kb upstream 2.0kb upstream 12075 true Chr_06: 31542263-31554337 Setaria viridis
Sevir.6G195000 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 31552338-31554337 Setaria viridis
Sevir.6G195000 2.0kb downstream 2.0kb downstream 12075 true Chr_06: 31540263-31552337 Setaria viridis
Sevir.6G195000 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 31540263-31542262 Setaria viridis
Sevir.6G195000 5.0kb upstream 5.0kb upstream 15075 true Chr_06: 31542263-31557337 Setaria viridis
Sevir.6G195000 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 31552338-31557337 Setaria viridis
Sevir.6G195000 5.0kb downstream 5.0kb downstream 15075 true Chr_06: 31537263-31552337 Setaria viridis
Sevir.6G195000 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 31537263-31542262 Setaria viridis
Sevir.6G195000 10.0kb upstream 10.0kb upstream 20075 true Chr_06: 31542263-31562337 Setaria viridis
Sevir.6G195000 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 31552338-31562337 Setaria viridis
Sevir.6G195000 10.0kb downstream 10.0kb downstream 20075 true Chr_06: 31532263-31552337 Setaria viridis
Sevir.6G195000 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 31532263-31542262 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176518 5267 Panicoideae View MSA
124584672 5269 Grass View MSA
122043899 5273 Angiosperm View MSA
121349940 5274 Embryophyte View MSA
123426394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain