Gene : Sevir.6G234400 S. viridis v2.1
Defline:  (1 of 1) PTHR10745//PTHR10745:SF6 - GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 // SUBFAMILY NOT NAMED Genomic Order:  2598
Name:  ? Sevir.6G234400 Secondary Identifier:  ? PAC:40621019
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRNA-CHARGING-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G234400 0.5kb upstream 0.5kb upstream 6483 true Chr_06: 34378296-34384778 Setaria viridis
Sevir.6G234400 0.5kb upstream 0.5kb upstream 500 false Chr_06: 34378296-34378795 Setaria viridis
Sevir.6G234400 0.5kb downstream 0.5kb downstream 6483 true Chr_06: 34378796-34385278 Setaria viridis
Sevir.6G234400 0.5kb downstream 0.5kb downstream 500 false Chr_06: 34384779-34385278 Setaria viridis
Sevir.6G234400 1.0kb upstream 1.0kb upstream 6983 true Chr_06: 34377796-34384778 Setaria viridis
Sevir.6G234400 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 34377796-34378795 Setaria viridis
Sevir.6G234400 1.0kb downstream 1.0kb downstream 6983 true Chr_06: 34378796-34385778 Setaria viridis
Sevir.6G234400 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 34384779-34385778 Setaria viridis
Sevir.6G234400 2.0kb upstream 2.0kb upstream 7983 true Chr_06: 34376796-34384778 Setaria viridis
Sevir.6G234400 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 34376796-34378795 Setaria viridis
Sevir.6G234400 2.0kb downstream 2.0kb downstream 7983 true Chr_06: 34378796-34386778 Setaria viridis
Sevir.6G234400 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 34384779-34386778 Setaria viridis
Sevir.6G234400 5.0kb upstream 5.0kb upstream 10983 true Chr_06: 34373796-34384778 Setaria viridis
Sevir.6G234400 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 34373796-34378795 Setaria viridis
Sevir.6G234400 5.0kb downstream 5.0kb downstream 10983 true Chr_06: 34378796-34389778 Setaria viridis
Sevir.6G234400 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 34384779-34389778 Setaria viridis
Sevir.6G234400 10.0kb upstream 10.0kb upstream 15983 true Chr_06: 34368796-34384778 Setaria viridis
Sevir.6G234400 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 34368796-34378795 Setaria viridis
Sevir.6G234400 10.0kb downstream 10.0kb downstream 15983 true Chr_06: 34378796-34394778 Setaria viridis
Sevir.6G234400 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 34384779-34394778 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195879 5267 Panicoideae View MSA
124570250 5269 Grass View MSA
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain