Gene : Sevir.6G219400 S. viridis v2.1
Defline:  (1 of 15) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  2435
Name:  ? Sevir.6G219400 Secondary Identifier:  ? PAC:40620485
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G219400 0.5kb upstream 0.5kb upstream 8062 true Chr_06: 33258596-33266657 Setaria viridis
Sevir.6G219400 0.5kb upstream 0.5kb upstream 500 false Chr_06: 33258596-33259095 Setaria viridis
Sevir.6G219400 0.5kb downstream 0.5kb downstream 8062 true Chr_06: 33259096-33267157 Setaria viridis
Sevir.6G219400 0.5kb downstream 0.5kb downstream 500 false Chr_06: 33266658-33267157 Setaria viridis
Sevir.6G219400 1.0kb upstream 1.0kb upstream 8562 true Chr_06: 33258096-33266657 Setaria viridis
Sevir.6G219400 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 33258096-33259095 Setaria viridis
Sevir.6G219400 1.0kb downstream 1.0kb downstream 8562 true Chr_06: 33259096-33267657 Setaria viridis
Sevir.6G219400 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 33266658-33267657 Setaria viridis
Sevir.6G219400 2.0kb upstream 2.0kb upstream 9562 true Chr_06: 33257096-33266657 Setaria viridis
Sevir.6G219400 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 33257096-33259095 Setaria viridis
Sevir.6G219400 2.0kb downstream 2.0kb downstream 9562 true Chr_06: 33259096-33268657 Setaria viridis
Sevir.6G219400 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 33266658-33268657 Setaria viridis
Sevir.6G219400 5.0kb upstream 5.0kb upstream 12562 true Chr_06: 33254096-33266657 Setaria viridis
Sevir.6G219400 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 33254096-33259095 Setaria viridis
Sevir.6G219400 5.0kb downstream 5.0kb downstream 12562 true Chr_06: 33259096-33271657 Setaria viridis
Sevir.6G219400 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 33266658-33271657 Setaria viridis
Sevir.6G219400 10.0kb upstream 10.0kb upstream 17562 true Chr_06: 33249096-33266657 Setaria viridis
Sevir.6G219400 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 33249096-33259095 Setaria viridis
Sevir.6G219400 10.0kb downstream 10.0kb downstream 17562 true Chr_06: 33259096-33276657 Setaria viridis
Sevir.6G219400 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 33266658-33276657 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187321 5267 Panicoideae View MSA
124574948 5269 Grass View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain