Gene : Sevir.7G146800 S. viridis v2.1
Defline:  (1 of 4) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  1573
Name:  ? Sevir.7G146800 Secondary Identifier:  ? PAC:40645028
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-2541 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.7G146800 0.5kb upstream 0.5kb upstream 9822 true Chr_07: 22021153-22030974 Setaria viridis
Sevir.7G146800 0.5kb upstream 0.5kb upstream 500 false Chr_07: 22030475-22030974 Setaria viridis
Sevir.7G146800 0.5kb downstream 0.5kb downstream 9822 true Chr_07: 22020653-22030474 Setaria viridis
Sevir.7G146800 0.5kb downstream 0.5kb downstream 500 false Chr_07: 22020653-22021152 Setaria viridis
Sevir.7G146800 1.0kb upstream 1.0kb upstream 10322 true Chr_07: 22021153-22031474 Setaria viridis
Sevir.7G146800 1.0kb upstream 1.0kb upstream 1000 false Chr_07: 22030475-22031474 Setaria viridis
Sevir.7G146800 1.0kb downstream 1.0kb downstream 10322 true Chr_07: 22020153-22030474 Setaria viridis
Sevir.7G146800 1.0kb downstream 1.0kb downstream 1000 false Chr_07: 22020153-22021152 Setaria viridis
Sevir.7G146800 2.0kb upstream 2.0kb upstream 11322 true Chr_07: 22021153-22032474 Setaria viridis
Sevir.7G146800 2.0kb upstream 2.0kb upstream 2000 false Chr_07: 22030475-22032474 Setaria viridis
Sevir.7G146800 2.0kb downstream 2.0kb downstream 11322 true Chr_07: 22019153-22030474 Setaria viridis
Sevir.7G146800 2.0kb downstream 2.0kb downstream 2000 false Chr_07: 22019153-22021152 Setaria viridis
Sevir.7G146800 5.0kb upstream 5.0kb upstream 14322 true Chr_07: 22021153-22035474 Setaria viridis
Sevir.7G146800 5.0kb upstream 5.0kb upstream 5000 false Chr_07: 22030475-22035474 Setaria viridis
Sevir.7G146800 5.0kb downstream 5.0kb downstream 14322 true Chr_07: 22016153-22030474 Setaria viridis
Sevir.7G146800 5.0kb downstream 5.0kb downstream 5000 false Chr_07: 22016153-22021152 Setaria viridis
Sevir.7G146800 10.0kb upstream 10.0kb upstream 19322 true Chr_07: 22021153-22040474 Setaria viridis
Sevir.7G146800 10.0kb upstream 10.0kb upstream 10000 false Chr_07: 22030475-22040474 Setaria viridis
Sevir.7G146800 10.0kb downstream 10.0kb downstream 19322 true Chr_07: 22011153-22030474 Setaria viridis
Sevir.7G146800 10.0kb downstream 10.0kb downstream 10000 false Chr_07: 22011153-22021152 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
122197932 5267 Panicoideae View MSA
124590016 5269 Grass View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain