Gene : Sevir.7G194600 S. viridis v2.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  2078
Name:  ? Sevir.7G194600 Secondary Identifier:  ? PAC:40640494
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5129 Setaria viridis pathologic  
Sviridis PWY-6483 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.7G194600 0.5kb upstream 0.5kb upstream 7441 true Chr_07: 25240690-25248130 Setaria viridis
Sevir.7G194600 0.5kb upstream 0.5kb upstream 500 false Chr_07: 25240690-25241189 Setaria viridis
Sevir.7G194600 0.5kb downstream 0.5kb downstream 7441 true Chr_07: 25241190-25248630 Setaria viridis
Sevir.7G194600 0.5kb downstream 0.5kb downstream 500 false Chr_07: 25248131-25248630 Setaria viridis
Sevir.7G194600 1.0kb upstream 1.0kb upstream 7941 true Chr_07: 25240190-25248130 Setaria viridis
Sevir.7G194600 1.0kb upstream 1.0kb upstream 1000 false Chr_07: 25240190-25241189 Setaria viridis
Sevir.7G194600 1.0kb downstream 1.0kb downstream 7941 true Chr_07: 25241190-25249130 Setaria viridis
Sevir.7G194600 1.0kb downstream 1.0kb downstream 1000 false Chr_07: 25248131-25249130 Setaria viridis
Sevir.7G194600 2.0kb upstream 2.0kb upstream 8941 true Chr_07: 25239190-25248130 Setaria viridis
Sevir.7G194600 2.0kb upstream 2.0kb upstream 2000 false Chr_07: 25239190-25241189 Setaria viridis
Sevir.7G194600 2.0kb downstream 2.0kb downstream 8941 true Chr_07: 25241190-25250130 Setaria viridis
Sevir.7G194600 2.0kb downstream 2.0kb downstream 2000 false Chr_07: 25248131-25250130 Setaria viridis
Sevir.7G194600 5.0kb upstream 5.0kb upstream 11941 true Chr_07: 25236190-25248130 Setaria viridis
Sevir.7G194600 5.0kb upstream 5.0kb upstream 5000 false Chr_07: 25236190-25241189 Setaria viridis
Sevir.7G194600 5.0kb downstream 5.0kb downstream 11941 true Chr_07: 25241190-25253130 Setaria viridis
Sevir.7G194600 5.0kb downstream 5.0kb downstream 5000 false Chr_07: 25248131-25253130 Setaria viridis
Sevir.7G194600 10.0kb upstream 10.0kb upstream 16941 true Chr_07: 25231190-25248130 Setaria viridis
Sevir.7G194600 10.0kb upstream 10.0kb upstream 10000 false Chr_07: 25231190-25241189 Setaria viridis
Sevir.7G194600 10.0kb downstream 10.0kb downstream 16941 true Chr_07: 25241190-25258130 Setaria viridis
Sevir.7G194600 10.0kb downstream 10.0kb downstream 10000 false Chr_07: 25248131-25258130 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183435 5267 Panicoideae View MSA
124569465 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain