Gene : gene22698-v2.0.a2-hybrid F. vesca v2.0.a2

Defline:  (1 of 1) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  2295
Name:  ? gene22698-v2.0.a2-hybrid Secondary Identifier:  ? PAC:40691549

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca GLYSYN-PWY Fragaria vesca pathologic  
Fvesca PWY-2161 Fragaria vesca pathologic  
Fvesca PWY-3841 Fragaria vesca pathologic  
Fvesca SER-GLYSYN-PWY Fragaria vesca pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene22698-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 5984 true Fvb1: 11928409-11934392 Fragaria vesca
gene22698-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb1: 11933893-11934392 Fragaria vesca
gene22698-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 5984 true Fvb1: 11927909-11933892 Fragaria vesca
gene22698-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb1: 11927909-11928408 Fragaria vesca
gene22698-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 6484 true Fvb1: 11928409-11934892 Fragaria vesca
gene22698-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb1: 11933893-11934892 Fragaria vesca
gene22698-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 6484 true Fvb1: 11927409-11933892 Fragaria vesca
gene22698-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb1: 11927409-11928408 Fragaria vesca
gene22698-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 7484 true Fvb1: 11928409-11935892 Fragaria vesca
gene22698-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb1: 11933893-11935892 Fragaria vesca
gene22698-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 7484 true Fvb1: 11926409-11933892 Fragaria vesca
gene22698-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb1: 11926409-11928408 Fragaria vesca
gene22698-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 10484 true Fvb1: 11928409-11938892 Fragaria vesca
gene22698-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb1: 11933893-11938892 Fragaria vesca
gene22698-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 10484 true Fvb1: 11923409-11933892 Fragaria vesca
gene22698-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb1: 11923409-11928408 Fragaria vesca
gene22698-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 15484 true Fvb1: 11928409-11943892 Fragaria vesca
gene22698-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb1: 11933893-11943892 Fragaria vesca
gene22698-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 15484 true Fvb1: 11918409-11933892 Fragaria vesca
gene22698-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb1: 11918409-11928408 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314119 5265 Fabidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain