Gene : gene24482-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 1) PTHR10742:SF294 - PROTOPORPHYRINOGEN OXIDASE 1, CHLOROPLASTIC Genomic Order:  2650
Name:  ? gene24482-v1.0-hybrid Secondary Identifier:  ? PAC:40694152
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca CHLOROPHYLL-SYN Fragaria vesca pathologic  
Fvesca HEME-BIOSYNTHESIS-II Fragaria vesca pathologic  
Fvesca PWY-5918 Fragaria vesca pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene24482-v1.0-hybrid 0.5kb upstream 0.5kb upstream 4133 true Fvb1: 14305720-14309852 Fragaria vesca
gene24482-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb1: 14309353-14309852 Fragaria vesca
gene24482-v1.0-hybrid 0.5kb downstream 0.5kb downstream 4133 true Fvb1: 14305220-14309352 Fragaria vesca
gene24482-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb1: 14305220-14305719 Fragaria vesca
gene24482-v1.0-hybrid 1.0kb upstream 1.0kb upstream 4633 true Fvb1: 14305720-14310352 Fragaria vesca
gene24482-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb1: 14309353-14310352 Fragaria vesca
gene24482-v1.0-hybrid 1.0kb downstream 1.0kb downstream 4633 true Fvb1: 14304720-14309352 Fragaria vesca
gene24482-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb1: 14304720-14305719 Fragaria vesca
gene24482-v1.0-hybrid 2.0kb upstream 2.0kb upstream 5633 true Fvb1: 14305720-14311352 Fragaria vesca
gene24482-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb1: 14309353-14311352 Fragaria vesca
gene24482-v1.0-hybrid 2.0kb downstream 2.0kb downstream 5633 true Fvb1: 14303720-14309352 Fragaria vesca
gene24482-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb1: 14303720-14305719 Fragaria vesca
gene24482-v1.0-hybrid 5.0kb upstream 5.0kb upstream 8633 true Fvb1: 14305720-14314352 Fragaria vesca
gene24482-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb1: 14309353-14314352 Fragaria vesca
gene24482-v1.0-hybrid 5.0kb downstream 5.0kb downstream 8633 true Fvb1: 14300720-14309352 Fragaria vesca
gene24482-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb1: 14300720-14305719 Fragaria vesca
gene24482-v1.0-hybrid 10.0kb upstream 10.0kb upstream 13633 true Fvb1: 14305720-14319352 Fragaria vesca
gene24482-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb1: 14309353-14319352 Fragaria vesca
gene24482-v1.0-hybrid 10.0kb downstream 10.0kb downstream 13633 true Fvb1: 14295720-14309352 Fragaria vesca
gene24482-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb1: 14295720-14305719 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305457 5265 Fabidae View MSA
124065931 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain