Gene : gene30616-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 1) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED Genomic Order:  658
Name:  ? gene30616-v1.0-hybrid Secondary Identifier:  ? PAC:40701960
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-695 Fragaria vesca pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene30616-v1.0-hybrid 0.5kb upstream 0.5kb upstream 2330 true Fvb3: 3162634-3164963 Fragaria vesca
gene30616-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb3: 3164464-3164963 Fragaria vesca
gene30616-v1.0-hybrid 0.5kb downstream 0.5kb downstream 2330 true Fvb3: 3162134-3164463 Fragaria vesca
gene30616-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb3: 3162134-3162633 Fragaria vesca
gene30616-v1.0-hybrid 1.0kb upstream 1.0kb upstream 2830 true Fvb3: 3162634-3165463 Fragaria vesca
gene30616-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb3: 3164464-3165463 Fragaria vesca
gene30616-v1.0-hybrid 1.0kb downstream 1.0kb downstream 2830 true Fvb3: 3161634-3164463 Fragaria vesca
gene30616-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb3: 3161634-3162633 Fragaria vesca
gene30616-v1.0-hybrid 2.0kb upstream 2.0kb upstream 3830 true Fvb3: 3162634-3166463 Fragaria vesca
gene30616-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb3: 3164464-3166463 Fragaria vesca
gene30616-v1.0-hybrid 2.0kb downstream 2.0kb downstream 3830 true Fvb3: 3160634-3164463 Fragaria vesca
gene30616-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb3: 3160634-3162633 Fragaria vesca
gene30616-v1.0-hybrid 5.0kb upstream 5.0kb upstream 6830 true Fvb3: 3162634-3169463 Fragaria vesca
gene30616-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb3: 3164464-3169463 Fragaria vesca
gene30616-v1.0-hybrid 5.0kb downstream 5.0kb downstream 6830 true Fvb3: 3157634-3164463 Fragaria vesca
gene30616-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb3: 3157634-3162633 Fragaria vesca
gene30616-v1.0-hybrid 10.0kb upstream 10.0kb upstream 11830 true Fvb3: 3162634-3174463 Fragaria vesca
gene30616-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb3: 3164464-3174463 Fragaria vesca
gene30616-v1.0-hybrid 10.0kb downstream 10.0kb downstream 11830 true Fvb3: 3152634-3164463 Fragaria vesca
gene30616-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb3: 3152634-3162633 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310479 5265 Fabidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain