Gene : gene29020-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 2) PTHR11771//PTHR11771:SF56 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  175
Name:  ? gene29020-v1.0-hybrid Secondary Identifier:  ? PAC:40682759
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-5409 Fragaria vesca pathologic  
Fvesca PWY-5410 Fragaria vesca pathologic  
Fvesca PWY-735 Fragaria vesca pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene29020-v1.0-hybrid 0.5kb upstream 0.5kb upstream 860 true Fvb4: 1288764-1289623 Fragaria vesca
gene29020-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb4: 1289124-1289623 Fragaria vesca
gene29020-v1.0-hybrid 0.5kb downstream 0.5kb downstream 860 true Fvb4: 1288264-1289123 Fragaria vesca
gene29020-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb4: 1288264-1288763 Fragaria vesca
gene29020-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1360 true Fvb4: 1288764-1290123 Fragaria vesca
gene29020-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb4: 1289124-1290123 Fragaria vesca
gene29020-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1360 true Fvb4: 1287764-1289123 Fragaria vesca
gene29020-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb4: 1287764-1288763 Fragaria vesca
gene29020-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2360 true Fvb4: 1288764-1291123 Fragaria vesca
gene29020-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb4: 1289124-1291123 Fragaria vesca
gene29020-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2360 true Fvb4: 1286764-1289123 Fragaria vesca
gene29020-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb4: 1286764-1288763 Fragaria vesca
gene29020-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5360 true Fvb4: 1288764-1294123 Fragaria vesca
gene29020-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb4: 1289124-1294123 Fragaria vesca
gene29020-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5360 true Fvb4: 1283764-1289123 Fragaria vesca
gene29020-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb4: 1283764-1288763 Fragaria vesca
gene29020-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10360 true Fvb4: 1288764-1299123 Fragaria vesca
gene29020-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb4: 1289124-1299123 Fragaria vesca
gene29020-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10360 true Fvb4: 1278764-1289123 Fragaria vesca
gene29020-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb4: 1278764-1288763 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313814 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain