Gene : gene25122-v1.0-hybrid F. vesca v2.0.a2

Defline:  (1 of 1) PTHR13301//PTHR13301:SF51 - X-BOX TRANSCRIPTION FACTOR-RELATED // CELLULOSE SYNTHASE-LIKE PROTEIN G1-RELATED Genomic Order:  1389
Name:  ? gene25122-v1.0-hybrid Secondary Identifier:  ? PAC:40675334

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-1001 Fragaria vesca pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene25122-v1.0-hybrid 0.5kb upstream 0.5kb upstream 4057 true Fvb5: 6811138-6815194 Fragaria vesca
gene25122-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb5: 6814695-6815194 Fragaria vesca
gene25122-v1.0-hybrid 0.5kb downstream 0.5kb downstream 4057 true Fvb5: 6810638-6814694 Fragaria vesca
gene25122-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb5: 6810638-6811137 Fragaria vesca
gene25122-v1.0-hybrid 1.0kb upstream 1.0kb upstream 4557 true Fvb5: 6811138-6815694 Fragaria vesca
gene25122-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb5: 6814695-6815694 Fragaria vesca
gene25122-v1.0-hybrid 1.0kb downstream 1.0kb downstream 4557 true Fvb5: 6810138-6814694 Fragaria vesca
gene25122-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb5: 6810138-6811137 Fragaria vesca
gene25122-v1.0-hybrid 2.0kb upstream 2.0kb upstream 5557 true Fvb5: 6811138-6816694 Fragaria vesca
gene25122-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb5: 6814695-6816694 Fragaria vesca
gene25122-v1.0-hybrid 2.0kb downstream 2.0kb downstream 5557 true Fvb5: 6809138-6814694 Fragaria vesca
gene25122-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb5: 6809138-6811137 Fragaria vesca
gene25122-v1.0-hybrid 5.0kb upstream 5.0kb upstream 8557 true Fvb5: 6811138-6819694 Fragaria vesca
gene25122-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb5: 6814695-6819694 Fragaria vesca
gene25122-v1.0-hybrid 5.0kb downstream 5.0kb downstream 8557 true Fvb5: 6806138-6814694 Fragaria vesca
gene25122-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb5: 6806138-6811137 Fragaria vesca
gene25122-v1.0-hybrid 10.0kb upstream 10.0kb upstream 13557 true Fvb5: 6811138-6824694 Fragaria vesca
gene25122-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb5: 6814695-6824694 Fragaria vesca
gene25122-v1.0-hybrid 10.0kb downstream 10.0kb downstream 13557 true Fvb5: 6801138-6814694 Fragaria vesca
gene25122-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb5: 6801138-6811137 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315597 5265 Fabidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain