Gene : gene05462-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 1) K00814 - alanine transaminase (GPT, ALT) Genomic Order:  4427
Name:  ? gene05462-v1.0-hybrid Secondary Identifier:  ? PAC:40660116
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca ALANINE-DEG3-PWY Fragaria vesca pathologic  
Fvesca ALANINE-SYN2-PWY Fragaria vesca pathologic  
Fvesca PWY-7115 Fragaria vesca pathologic  
Fvesca PWY-7117 Fragaria vesca pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene05462-v1.0-hybrid 0.5kb upstream 0.5kb upstream 5659 true Fvb6: 27913621-27919279 Fragaria vesca
gene05462-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb6: 27918780-27919279 Fragaria vesca
gene05462-v1.0-hybrid 0.5kb downstream 0.5kb downstream 5659 true Fvb6: 27913121-27918779 Fragaria vesca
gene05462-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb6: 27913121-27913620 Fragaria vesca
gene05462-v1.0-hybrid 1.0kb upstream 1.0kb upstream 6159 true Fvb6: 27913621-27919779 Fragaria vesca
gene05462-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb6: 27918780-27919779 Fragaria vesca
gene05462-v1.0-hybrid 1.0kb downstream 1.0kb downstream 6159 true Fvb6: 27912621-27918779 Fragaria vesca
gene05462-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb6: 27912621-27913620 Fragaria vesca
gene05462-v1.0-hybrid 2.0kb upstream 2.0kb upstream 7159 true Fvb6: 27913621-27920779 Fragaria vesca
gene05462-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb6: 27918780-27920779 Fragaria vesca
gene05462-v1.0-hybrid 2.0kb downstream 2.0kb downstream 7159 true Fvb6: 27911621-27918779 Fragaria vesca
gene05462-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb6: 27911621-27913620 Fragaria vesca
gene05462-v1.0-hybrid 5.0kb upstream 5.0kb upstream 10159 true Fvb6: 27913621-27923779 Fragaria vesca
gene05462-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb6: 27918780-27923779 Fragaria vesca
gene05462-v1.0-hybrid 5.0kb downstream 5.0kb downstream 10159 true Fvb6: 27908621-27918779 Fragaria vesca
gene05462-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb6: 27908621-27913620 Fragaria vesca
gene05462-v1.0-hybrid 10.0kb upstream 10.0kb upstream 15159 true Fvb6: 27913621-27928779 Fragaria vesca
gene05462-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb6: 27918780-27928779 Fragaria vesca
gene05462-v1.0-hybrid 10.0kb downstream 10.0kb downstream 15159 true Fvb6: 27903621-27918779 Fragaria vesca
gene05462-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb6: 27903621-27913620 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301805 5265 Fabidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain