Protein Domain : IPR001638

Type:  Domain Name:  Solute-binding protein family 3/N-terminal domain of MltF
Description:  Bacterial high affinity transport systems are involved in active transport of solutes across the cytoplasmic membrane. Most of the bacterial ABC (ATP-binding cassette) importers are composed of one or two transmembrane permease proteins, one or two nucleotide-binding proteins and a highly specific periplasmic solute-binding protein. In Gram-negative bacteria the solute-binding proteins are dissolved in the periplasm, while in archaea and Gram-positive bacteria, their solute-binding proteins are membrane-anchored lipoproteins [, ]. On the basis of sequence similarities, the vast majority of these solute-binding proteins can be grouped [] into eight families or clusters, which generally correlate with the nature of the solute bound.This entry represents a domain found in the solute-binding protein family 3 members from Gram-positive bacteria, Gram-negative bacteria and archaea. This domain can also be found in the N-terminal of the membrane-bound lytic murein transglycosylase F (MltF) protein. MltF is a murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product [].Familiy 3 members include:Histidine-binding protein (gene hisJ) of Escherichia coli and related bacteria. An homologous lipoprotein exists in Neisseria gonorrhoeae. Lysine/arginine/ornithine-binding proteins (LAO) (gene argT) of Escherichia coli and related bacteria are involved in the same transport system than hisJ. Both solute-binding proteins interact with a common membrane-bound receptor hisP of the binding protein dependent transport system HisQMP. Glutamine-binding proteins (gene glnH) of Escherichia coli and Bacillus stearothermophilus.Glutamate-binding protein (gene gluB) of Corynebacterium glutamicum. Arginine-binding proteins artI and artJ of Escherichia coli. Nopaline-binding protein (gene nocT) from Agrobacterium tumefaciens. Octopine-binding protein (gene occT) from Agrobacterium tumefaciens. Major cell-binding factor (CBF1) (gene: peb1A) from Campylobacter jejuni. Bacteroides nodosus protein aabA. Cyclohexadienyl/arogenate dehydratase of Pseudomonas aeruginosa, a periplasmic enzyme which forms an alternative pathway for phenylalanine biosynthesis. Escherichia coli protein fliY. Vibrio harveyi protein patH. Escherichia coli hypothetical protein ydhW. Bacillus subtilis hypothetical protein yckB. Bacillus subtilis hypothetical protein yckK. Short Name:  Solute-binding_3/MltF_N

0 Child Features

1 Contains

DB identifier Type Name
IPR018313 Conserved_site Solute-binding protein family 3, conserved site

1 Cross References

Identifier
SM00062

1 Found In

DB identifier Type Name
IPR001508 Family Ionotropic glutamate receptor, metazoa

0 GO Annotation

0 Ontology Annotations

0 Parent Features

332 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
30100.m000785 B9S3N7 PAC:16817763 Ricinus communis 924  
32780.m000025 B9TFQ9 PAC:16825555 Ricinus communis 264  
34415.m000016 B9TFL9 PAC:16826209 Ricinus communis 387  
28944.m000057 B9TA58 PAC:16802009 Ricinus communis 317  
AT5G11180.1 A0A7G2FCT0 PAC:19670548 Arabidopsis thaliana 906  
Thhalv10016205m V4M6B5 PAC:20180834 Eutrema salsugineum 920  
Thhalv10022533m V4M3J8 PAC:20201911 Eutrema salsugineum 937  
Thhalv10012669m V4LFB1 PAC:20204343 Eutrema salsugineum 856  
Ciclev10017605m V4TL69 PAC:20815514 Citrus clementina 541  
Lus10020109 PAC:23142025 Linum usitatissimum 942  
Lus10026876 PAC:23142843 Linum usitatissimum 632  
Lus10026913 PAC:23142966 Linum usitatissimum 844  
Thecc1EG034421t6 A0A061FLF5 PAC:27457570 Theobroma cacao 870  
Cagra.10702s0007.1.p PAC:28897217 Capsella grandiflora 776  
Cagra.0133s0095.1.p PAC:28899415 Capsella grandiflora 861  
Cagra.14254s0004.1.p PAC:28905884 Capsella grandiflora 608  
Cagra.15158s0003.1.p PAC:28902647 Capsella grandiflora 895  
Cagra.1671s0141.1.p PAC:28913964 Capsella grandiflora 950  
Cagra.1671s0141.2.p PAC:28913963 Capsella grandiflora 950  
Cagra.1731s0002.1.p PAC:28918606 Capsella grandiflora 553  
Cagra.1731s0001.1.p PAC:28918607 Capsella grandiflora 598  
Cagra.2350s0073.1.p PAC:28908738 Capsella grandiflora 908  
Cagra.3030s0001.1.p PAC:28901629 Capsella grandiflora 815  
Cagra.3264s0011.1.p PAC:28912443 Capsella grandiflora 609  
Cagra.3264s0012.1.p PAC:28912440 Capsella grandiflora 944  
Cagra.3264s0013.1.p PAC:28912442 Capsella grandiflora 961  
Cagra.0352s0028.1.p PAC:28897316 Capsella grandiflora 923  
Cagra.0352s0027.1.p PAC:28897295 Capsella grandiflora 912  
Cagra.0352s0028.2.p PAC:28897315 Capsella grandiflora 923  
Cagra.6119s0002.1.p PAC:28919807 Capsella grandiflora 941  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8336670
            18310026
            8003968
            18234673