Protein Domain : IPR012884

Type:  Domain Name:  Excisionase-like
Description:  The phage-encoded excisionase protein (Xis, ) is involved in excisive recombination by regulating the assembly of the excisive intasome and by inhibiting viral integration. It adopts an unusual winged-helix structure in which two alpha helices are packed against two extended strands. Also present in the structure is a two-stranded anti-parallel beta-sheet, whose strands are connected by a four-residue wing. During interaction with DNA, helix alpha2 is thought to insert into the major groove, while the wing contacts the adjacent minor groove or phosphodiester backbone. The C-terminal region of Xis is involved in interaction with phage-encoded integrase (Int), and a putative C-terminal alpha helix may fold upon interaction with Int and/or DNA []. Short Name:  Excisionase-like

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF07825
G3DSA:1.10.1660.20

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0003677 IPR012884
GO:0006310 IPR012884

2 Ontology Annotations

GO Term Gene Name
GO:0003677 IPR012884
GO:0006310 IPR012884

1 Parent Features

DB identifier Type Name
IPR009061 Domain Putative DNA-binding domain

78 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
29844.m003296 B9RTS5 PAC:16811003 Ricinus communis 110  
Thhalv10025697m V4LUG3 PAC:20193911 Eutrema salsugineum 328  
Thhalv10025700m V4MCU9 PAC:20193912 Eutrema salsugineum 327  
Thhalv10025678m V4P487 PAC:20193910 Eutrema salsugineum 332  
Potri.003G036700.1 A0A2K2B128 PAC:26996729 Populus trichocarpa 103  
64898 C1EJD7 PAC:27397252 Micromonas sp RCC299 192  
41640 A4S669 PAC:27418639 Ostreococcus lucimarinus 398  
Cre03.g200879.t1.1 A0A2K3DZM6 PAC:30787734 Chlamydomonas reinhardtii 458  
Cre03.g200879.t2.1 A0A2K3DZK7 PAC:30787735 Chlamydomonas reinhardtii 407  
Cre03.g200767.t1.1 A0A2K3DZN5 PAC:30787715 Chlamydomonas reinhardtii 439  
GSMUA_Achr1P18690_001 PAC:32312268 Musa acuminata 211  
Kalax.0026s0124.1.p PAC:32580393 Kalanchoe laxiflora 141  
Sevir.3G008400.1.p A0A4V6D905 PAC:32677447 Setaria viridis 416  
Sevir.8G259800.1.p A0A4U6TNZ6 PAC:32633689 Setaria viridis 421  
Sevir.5G465100.1.p A0A4U6UU00 PAC:32674131 Setaria viridis 436  
Seita.3G007200.1.p K3Z6K1 PAC:32710575 Setaria italica 416  
Seita.5G458600.1.p K3XSU6 PAC:32681283 Setaria italica 437  
Aqcoe2G355200.2.p PAC:33060953 Aquilegia coerulea 193  
Aqcoe2G355200.7.p PAC:33060948 Aquilegia coerulea 347  
Aqcoe2G355200.4.p A0A2G5CJW5 PAC:33060949 Aquilegia coerulea 305  
Aqcoe2G355200.1.p A0A2G5CJZ8 PAC:33060947 Aquilegia coerulea 390  
Aqcoe2G355200.5.p A0A2G5CJZ1 PAC:33060951 Aquilegia coerulea 249  
Aqcoe2G355200.3.p PAC:33060950 Aquilegia coerulea 262  
Aqcoe2G355200.6.p PAC:33060952 Aquilegia coerulea 236  
Zosma584g00010.1 A0A0K9NXL1 PAC:33172365 Zostera marina 117  
Brdisv1Tek-21044892m.p PAC:33922630 Brachypodium distachyon Tek-2 337  
Brdisv1Bd29-11026365m.p PAC:34147371 Brachypodium distachyon Bd29-1 227  
Brdisv1BdTR12c1028520m.p PAC:34407279 Brachypodium distachyon BdTR12c 195  
Brdisv1Jer11003697m.p PAC:35439349 Brachypodium distachyon Jer1 139  
Potri.003G036700.1.p A0A2K2B128 PAC:37238823 Populus trichocarpa 103  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12460578