Protein Domain : IPR013839

Type:  Domain Name:  NAD-dependent DNA ligase, adenylation
Description:  DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalyzing the formation of an internucleotide ester bond between phosphate and deoxyribose. It is active during DNA replication, DNA repair and DNA recombination. There are two forms of DNA ligase: one requires ATP (), the other NAD ().This entry represents the N-terminal adenylation domain of NAD-dependent DNA ligases. These are proteins of about 75 to 85 Kd whose sequence is well conserved [, ]. They also show similarity to yicF, an Escherichia colihypothetical protein of 63 Kd. Despite a complete lack of detectable sequence similarity, the fold of the central core of this adenyaltion domain shares homology with the equivalent region of ATP-dependent DNA ligases [, ]. Short Name:  DNAligase_adenylation

0 Child Features

1 Contains

DB identifier Type Name
IPR018239 Active_site NAD-dependent DNA ligase, active site

1 Cross References

Identifier
PF01653

3 Found Ins

DB identifier Type Name
IPR001679 Family NAD-dependent DNA ligase
IPR013840 Domain NAD-dependent DNA ligase, N-terminal
IPR020923 Family DNA ligase B

1 GO Annotation

GO Term Gene Name
GO:0003911 IPR013839

1 Ontology Annotations

GO Term Gene Name
GO:0003911 IPR013839

0 Parent Features

30 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
31200.m000015 B9TDA3 PAC:16824879 Ricinus communis 491  
179233 PAC:27341052 Micromonas pusilla CCMP1545 764  
29450 A4SB11 PAC:27420309 Ostreococcus lucimarinus 755  
Araha.11756s0311.1.p PAC:28856352 Arabidopsis halleri 669  
Cre06.g294200.t1.1 A0A2K3DQM5 PAC:30779211 Chlamydomonas reinhardtii 966  
Sphfalx0033s0069.1.p PAC:32626125 Sphagnum fallax 1119  
Pp3c23_20740V3.1.p A0A2K1IK62 PAC:32948613 Physcomitrium patens 1051  
Pp3c23_20740V3.2.p A0A2K1IK62 PAC:32948614 Physcomitrium patens 1051  
Pp3s32_280V3.1.p PAC:32948403 Physcomitrium patens 2359  
Mapoly0107s0037.1.p A0A2R6WD39 PAC:33020967 Marchantia polymorpha 1064  
Dusal.0194s00007.1.p PAC:33199919 Dunaliella salina 959  
Pum0027s0115.1.p A0A1X6PJS6 PAC:38017269 Porphyra umbilicalis 780  
Cz11g21030.t1 PAC:38237592 Chromochloris zofingiensis 876  
Bobra.0102s0036.1.p PAC:40719721 Botryococcus braunii 735  
Sphmag10G021800.3.p PAC:41941386 Sphagnum magellanicum 1083  
Sphmag10G021800.4.p PAC:41941385 Sphagnum magellanicum 1094  
Sphmag10G021800.2.p PAC:41941384 Sphagnum magellanicum 1113  
Sphmag10G021800.1.p PAC:41941383 Sphagnum magellanicum 1124  
Sphfalx10G025300.1.p PAC:41977190 Sphagnum fallax 1119  
CepurR40.6G224300.1.p PAC:43012771 Ceratodon purpureus R40 163  
CepurR40.6G226700.1.p PAC:43012646 Ceratodon purpureus R40 210  
CepurR40.6G226800.1.p PAC:43010708 Ceratodon purpureus R40 119  
CepurR40.6G223800.1.p PAC:43012609 Ceratodon purpureus R40 163  
CepurR40.8G039100.1.p PAC:42991862 Ceratodon purpureus R40 178  
CepurR40.12G127600.1.p PAC:43016316 Ceratodon purpureus R40 1027  
CepurR40.VG000300.1.p PAC:43021827 Ceratodon purpureus R40 210  
CepurGG1.UG214000.1.p PAC:43053623 Ceratodon purpureus GG1 189  
CepurGG1.UG213800.1.p PAC:43050047 Ceratodon purpureus GG1 92  
CepurGG1.12G130300.1.p PAC:43054223 Ceratodon purpureus GG1 1027  
Vocar.0024s0125.1.p PAC:32890371 Volvox carteri 1128  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1526462
            8390989
            10698952
            10368271