Gene : Brara.F01758 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11089:SF43 - NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1758
Name:  ? Brara.F01758 Secondary Identifier:  ? PAC:30628886
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6845 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01758 0.5kb upstream 0.5kb upstream 3572 true A06: 11012951-11016522 Brassica rapa FPsc
Brara.F01758 0.5kb upstream 0.5kb upstream 500 false A06: 11012951-11013450 Brassica rapa FPsc
Brara.F01758 0.5kb downstream 0.5kb downstream 3572 true A06: 11013451-11017022 Brassica rapa FPsc
Brara.F01758 0.5kb downstream 0.5kb downstream 500 false A06: 11016523-11017022 Brassica rapa FPsc
Brara.F01758 1.0kb upstream 1.0kb upstream 4072 true A06: 11012451-11016522 Brassica rapa FPsc
Brara.F01758 1.0kb upstream 1.0kb upstream 1000 false A06: 11012451-11013450 Brassica rapa FPsc
Brara.F01758 1.0kb downstream 1.0kb downstream 4072 true A06: 11013451-11017522 Brassica rapa FPsc
Brara.F01758 1.0kb downstream 1.0kb downstream 1000 false A06: 11016523-11017522 Brassica rapa FPsc
Brara.F01758 2.0kb upstream 2.0kb upstream 5072 true A06: 11011451-11016522 Brassica rapa FPsc
Brara.F01758 2.0kb upstream 2.0kb upstream 2000 false A06: 11011451-11013450 Brassica rapa FPsc
Brara.F01758 2.0kb downstream 2.0kb downstream 5072 true A06: 11013451-11018522 Brassica rapa FPsc
Brara.F01758 2.0kb downstream 2.0kb downstream 2000 false A06: 11016523-11018522 Brassica rapa FPsc
Brara.F01758 5.0kb upstream 5.0kb upstream 8072 true A06: 11008451-11016522 Brassica rapa FPsc
Brara.F01758 5.0kb upstream 5.0kb upstream 5000 false A06: 11008451-11013450 Brassica rapa FPsc
Brara.F01758 5.0kb downstream 5.0kb downstream 8072 true A06: 11013451-11021522 Brassica rapa FPsc
Brara.F01758 5.0kb downstream 5.0kb downstream 5000 false A06: 11016523-11021522 Brassica rapa FPsc
Brara.F01758 10.0kb upstream 10.0kb upstream 13072 true A06: 11003451-11016522 Brassica rapa FPsc
Brara.F01758 10.0kb upstream 10.0kb upstream 10000 false A06: 11003451-11013450 Brassica rapa FPsc
Brara.F01758 10.0kb downstream 10.0kb downstream 13072 true A06: 11013451-11026522 Brassica rapa FPsc
Brara.F01758 10.0kb downstream 10.0kb downstream 10000 false A06: 11016523-11026522 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374132 5261 Brassicaceae View MSA
123833305 5264 Brassicales-Malvales View MSA
124342471 5266 SBM View MSA
124243451 5268 Malvidae View MSA
124065366 5270 Rosid View MSA
123739170 5271 Pentapetalae View MSA
122792557 5272 Eudicot View MSA
122045244 5273 Angiosperm View MSA
121346425 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier