Gene : Brara.D00478 B. rapa FPsc v1.3
Defline:  (1 of 2) 4.1.1.33 - Diphosphomevalonate decarboxylase / Mevalonate pyrophosphate decarboxylase Genomic Order:  478
Name:  ? Brara.D00478 Secondary Identifier:  ? PAC:30620417
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5910 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-922 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00478 0.5kb upstream 0.5kb upstream 4040 true A04: 3547280-3551319 Brassica rapa FPsc
Brara.D00478 0.5kb upstream 0.5kb upstream 500 false A04: 3547280-3547779 Brassica rapa FPsc
Brara.D00478 0.5kb downstream 0.5kb downstream 4040 true A04: 3547780-3551819 Brassica rapa FPsc
Brara.D00478 0.5kb downstream 0.5kb downstream 500 false A04: 3551320-3551819 Brassica rapa FPsc
Brara.D00478 1.0kb upstream 1.0kb upstream 4540 true A04: 3546780-3551319 Brassica rapa FPsc
Brara.D00478 1.0kb upstream 1.0kb upstream 1000 false A04: 3546780-3547779 Brassica rapa FPsc
Brara.D00478 1.0kb downstream 1.0kb downstream 4540 true A04: 3547780-3552319 Brassica rapa FPsc
Brara.D00478 1.0kb downstream 1.0kb downstream 1000 false A04: 3551320-3552319 Brassica rapa FPsc
Brara.D00478 2.0kb upstream 2.0kb upstream 5540 true A04: 3545780-3551319 Brassica rapa FPsc
Brara.D00478 2.0kb upstream 2.0kb upstream 2000 false A04: 3545780-3547779 Brassica rapa FPsc
Brara.D00478 2.0kb downstream 2.0kb downstream 5540 true A04: 3547780-3553319 Brassica rapa FPsc
Brara.D00478 2.0kb downstream 2.0kb downstream 2000 false A04: 3551320-3553319 Brassica rapa FPsc
Brara.D00478 5.0kb upstream 5.0kb upstream 8540 true A04: 3542780-3551319 Brassica rapa FPsc
Brara.D00478 5.0kb upstream 5.0kb upstream 5000 false A04: 3542780-3547779 Brassica rapa FPsc
Brara.D00478 5.0kb downstream 5.0kb downstream 8540 true A04: 3547780-3556319 Brassica rapa FPsc
Brara.D00478 5.0kb downstream 5.0kb downstream 5000 false A04: 3551320-3556319 Brassica rapa FPsc
Brara.D00478 10.0kb upstream 10.0kb upstream 13540 true A04: 3537780-3551319 Brassica rapa FPsc
Brara.D00478 10.0kb upstream 10.0kb upstream 10000 false A04: 3537780-3547779 Brassica rapa FPsc
Brara.D00478 10.0kb downstream 10.0kb downstream 13540 true A04: 3547780-3561319 Brassica rapa FPsc
Brara.D00478 10.0kb downstream 10.0kb downstream 10000 false A04: 3551320-3561319 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
122378067 5261 Brassicaceae View MSA
123830303 5264 Brassicales-Malvales View MSA
124340099 5266 SBM View MSA
124242866 5268 Malvidae View MSA
124066077 5270 Rosid View MSA
123742848 5271 Pentapetalae View MSA
122793764 5272 Eudicot View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier