Gene : Brara.F01558 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR20275:SF6 - NADH KINASE POS5, MITOCHONDRIAL Genomic Order:  1558
Name:  ? Brara.F01558 Secondary Identifier:  ? PAC:30629622
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5083 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01558 0.5kb upstream 0.5kb upstream 4777 true A06: 9230768-9235544 Brassica rapa FPsc
Brara.F01558 0.5kb upstream 0.5kb upstream 500 false A06: 9230768-9231267 Brassica rapa FPsc
Brara.F01558 0.5kb downstream 0.5kb downstream 4777 true A06: 9231268-9236044 Brassica rapa FPsc
Brara.F01558 0.5kb downstream 0.5kb downstream 500 false A06: 9235545-9236044 Brassica rapa FPsc
Brara.F01558 1.0kb upstream 1.0kb upstream 5277 true A06: 9230268-9235544 Brassica rapa FPsc
Brara.F01558 1.0kb upstream 1.0kb upstream 1000 false A06: 9230268-9231267 Brassica rapa FPsc
Brara.F01558 1.0kb downstream 1.0kb downstream 5277 true A06: 9231268-9236544 Brassica rapa FPsc
Brara.F01558 1.0kb downstream 1.0kb downstream 1000 false A06: 9235545-9236544 Brassica rapa FPsc
Brara.F01558 2.0kb upstream 2.0kb upstream 6277 true A06: 9229268-9235544 Brassica rapa FPsc
Brara.F01558 2.0kb upstream 2.0kb upstream 2000 false A06: 9229268-9231267 Brassica rapa FPsc
Brara.F01558 2.0kb downstream 2.0kb downstream 6277 true A06: 9231268-9237544 Brassica rapa FPsc
Brara.F01558 2.0kb downstream 2.0kb downstream 2000 false A06: 9235545-9237544 Brassica rapa FPsc
Brara.F01558 5.0kb upstream 5.0kb upstream 9277 true A06: 9226268-9235544 Brassica rapa FPsc
Brara.F01558 5.0kb upstream 5.0kb upstream 5000 false A06: 9226268-9231267 Brassica rapa FPsc
Brara.F01558 5.0kb downstream 5.0kb downstream 9277 true A06: 9231268-9240544 Brassica rapa FPsc
Brara.F01558 5.0kb downstream 5.0kb downstream 5000 false A06: 9235545-9240544 Brassica rapa FPsc
Brara.F01558 10.0kb upstream 10.0kb upstream 14277 true A06: 9221268-9235544 Brassica rapa FPsc
Brara.F01558 10.0kb upstream 10.0kb upstream 10000 false A06: 9221268-9231267 Brassica rapa FPsc
Brara.F01558 10.0kb downstream 10.0kb downstream 14277 true A06: 9231268-9245544 Brassica rapa FPsc
Brara.F01558 10.0kb downstream 10.0kb downstream 10000 false A06: 9235545-9245544 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366031 5261 Brassicaceae View MSA
123835943 5264 Brassicales-Malvales View MSA
124340798 5266 SBM View MSA
124251776 5268 Malvidae View MSA
124068883 5270 Rosid View MSA
123747972 5271 Pentapetalae View MSA
122793469 5272 Eudicot View MSA
122042984 5273 Angiosperm View MSA
121349739 5274 Embryophyte View MSA
123425454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier