Gene : Brara.D00389 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31100:SF13 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 15 Genomic Order:  389
Name:  ? Brara.D00389 Secondary Identifier:  ? PAC:30621074
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00389 0.5kb upstream 0.5kb upstream 2595 true A04: 2791079-2793673 Brassica rapa FPsc
Brara.D00389 0.5kb upstream 0.5kb upstream 500 false A04: 2791079-2791578 Brassica rapa FPsc
Brara.D00389 0.5kb downstream 0.5kb downstream 2595 true A04: 2791579-2794173 Brassica rapa FPsc
Brara.D00389 0.5kb downstream 0.5kb downstream 500 false A04: 2793674-2794173 Brassica rapa FPsc
Brara.D00389 1.0kb upstream 1.0kb upstream 3095 true A04: 2790579-2793673 Brassica rapa FPsc
Brara.D00389 1.0kb upstream 1.0kb upstream 1000 false A04: 2790579-2791578 Brassica rapa FPsc
Brara.D00389 1.0kb downstream 1.0kb downstream 3095 true A04: 2791579-2794673 Brassica rapa FPsc
Brara.D00389 1.0kb downstream 1.0kb downstream 1000 false A04: 2793674-2794673 Brassica rapa FPsc
Brara.D00389 2.0kb upstream 2.0kb upstream 4095 true A04: 2789579-2793673 Brassica rapa FPsc
Brara.D00389 2.0kb upstream 2.0kb upstream 2000 false A04: 2789579-2791578 Brassica rapa FPsc
Brara.D00389 2.0kb downstream 2.0kb downstream 4095 true A04: 2791579-2795673 Brassica rapa FPsc
Brara.D00389 2.0kb downstream 2.0kb downstream 2000 false A04: 2793674-2795673 Brassica rapa FPsc
Brara.D00389 5.0kb upstream 5.0kb upstream 7095 true A04: 2786579-2793673 Brassica rapa FPsc
Brara.D00389 5.0kb upstream 5.0kb upstream 5000 false A04: 2786579-2791578 Brassica rapa FPsc
Brara.D00389 5.0kb downstream 5.0kb downstream 7095 true A04: 2791579-2798673 Brassica rapa FPsc
Brara.D00389 5.0kb downstream 5.0kb downstream 5000 false A04: 2793674-2798673 Brassica rapa FPsc
Brara.D00389 10.0kb upstream 10.0kb upstream 12095 true A04: 2781579-2793673 Brassica rapa FPsc
Brara.D00389 10.0kb upstream 10.0kb upstream 10000 false A04: 2781579-2791578 Brassica rapa FPsc
Brara.D00389 10.0kb downstream 10.0kb downstream 12095 true A04: 2791579-2803673 Brassica rapa FPsc
Brara.D00389 10.0kb downstream 10.0kb downstream 10000 false A04: 2793674-2803673 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348519 5261 Brassicaceae Singleton cluster - no MSA
123787849 5264 Brassicales-Malvales Singleton cluster - no MSA
124350421 5266 SBM View MSA
124237639 5268 Malvidae View MSA
124060975 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier