Gene : Brara.F01464 B. rapa FPsc v1.3
Defline:  (1 of 2) 6.2.1.1//6.2.1.2 - Acetate--CoA ligase / Acyl-activating enzyme // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  1464
Name:  ? Brara.F01464 Secondary Identifier:  ? PAC:30628223
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-321 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5143 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5147 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5885 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-21 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6733 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6803 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01464 0.5kb upstream 0.5kb upstream 2617 true A06: 8491374-8493990 Brassica rapa FPsc
Brara.F01464 0.5kb upstream 0.5kb upstream 500 false A06: 8493491-8493990 Brassica rapa FPsc
Brara.F01464 0.5kb downstream 0.5kb downstream 2617 true A06: 8490874-8493490 Brassica rapa FPsc
Brara.F01464 0.5kb downstream 0.5kb downstream 500 false A06: 8490874-8491373 Brassica rapa FPsc
Brara.F01464 1.0kb upstream 1.0kb upstream 3117 true A06: 8491374-8494490 Brassica rapa FPsc
Brara.F01464 1.0kb upstream 1.0kb upstream 1000 false A06: 8493491-8494490 Brassica rapa FPsc
Brara.F01464 1.0kb downstream 1.0kb downstream 3117 true A06: 8490374-8493490 Brassica rapa FPsc
Brara.F01464 1.0kb downstream 1.0kb downstream 1000 false A06: 8490374-8491373 Brassica rapa FPsc
Brara.F01464 2.0kb upstream 2.0kb upstream 4117 true A06: 8491374-8495490 Brassica rapa FPsc
Brara.F01464 2.0kb upstream 2.0kb upstream 2000 false A06: 8493491-8495490 Brassica rapa FPsc
Brara.F01464 2.0kb downstream 2.0kb downstream 4117 true A06: 8489374-8493490 Brassica rapa FPsc
Brara.F01464 2.0kb downstream 2.0kb downstream 2000 false A06: 8489374-8491373 Brassica rapa FPsc
Brara.F01464 5.0kb upstream 5.0kb upstream 7117 true A06: 8491374-8498490 Brassica rapa FPsc
Brara.F01464 5.0kb upstream 5.0kb upstream 5000 false A06: 8493491-8498490 Brassica rapa FPsc
Brara.F01464 5.0kb downstream 5.0kb downstream 7117 true A06: 8486374-8493490 Brassica rapa FPsc
Brara.F01464 5.0kb downstream 5.0kb downstream 5000 false A06: 8486374-8491373 Brassica rapa FPsc
Brara.F01464 10.0kb upstream 10.0kb upstream 12117 true A06: 8491374-8503490 Brassica rapa FPsc
Brara.F01464 10.0kb upstream 10.0kb upstream 10000 false A06: 8493491-8503490 Brassica rapa FPsc
Brara.F01464 10.0kb downstream 10.0kb downstream 12117 true A06: 8481374-8493490 Brassica rapa FPsc
Brara.F01464 10.0kb downstream 10.0kb downstream 10000 false A06: 8481374-8491373 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373385 5261 Brassicaceae View MSA
123831950 5264 Brassicales-Malvales View MSA
124346477 5266 SBM View MSA
124241808 5268 Malvidae View MSA
124066273 5270 Rosid View MSA
123743208 5271 Pentapetalae View MSA
122788469 5272 Eudicot View MSA
122048033 5273 Angiosperm View MSA
121349536 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier