Gene : Brara.A00846 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR10168:SF14 - GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  846
Name:  ? Brara.A00846 Secondary Identifier:  ? PAC:30639706
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00846 0.5kb upstream 0.5kb upstream 1980 true A01: 4281196-4283175 Brassica rapa FPsc
Brara.A00846 0.5kb upstream 0.5kb upstream 500 false A01: 4282676-4283175 Brassica rapa FPsc
Brara.A00846 0.5kb downstream 0.5kb downstream 1980 true A01: 4280696-4282675 Brassica rapa FPsc
Brara.A00846 0.5kb downstream 0.5kb downstream 500 false A01: 4280696-4281195 Brassica rapa FPsc
Brara.A00846 1.0kb upstream 1.0kb upstream 2480 true A01: 4281196-4283675 Brassica rapa FPsc
Brara.A00846 1.0kb upstream 1.0kb upstream 1000 false A01: 4282676-4283675 Brassica rapa FPsc
Brara.A00846 1.0kb downstream 1.0kb downstream 2480 true A01: 4280196-4282675 Brassica rapa FPsc
Brara.A00846 1.0kb downstream 1.0kb downstream 1000 false A01: 4280196-4281195 Brassica rapa FPsc
Brara.A00846 2.0kb upstream 2.0kb upstream 3480 true A01: 4281196-4284675 Brassica rapa FPsc
Brara.A00846 2.0kb upstream 2.0kb upstream 2000 false A01: 4282676-4284675 Brassica rapa FPsc
Brara.A00846 2.0kb downstream 2.0kb downstream 3480 true A01: 4279196-4282675 Brassica rapa FPsc
Brara.A00846 2.0kb downstream 2.0kb downstream 2000 false A01: 4279196-4281195 Brassica rapa FPsc
Brara.A00846 5.0kb upstream 5.0kb upstream 6480 true A01: 4281196-4287675 Brassica rapa FPsc
Brara.A00846 5.0kb upstream 5.0kb upstream 5000 false A01: 4282676-4287675 Brassica rapa FPsc
Brara.A00846 5.0kb downstream 5.0kb downstream 6480 true A01: 4276196-4282675 Brassica rapa FPsc
Brara.A00846 5.0kb downstream 5.0kb downstream 5000 false A01: 4276196-4281195 Brassica rapa FPsc
Brara.A00846 10.0kb upstream 10.0kb upstream 11480 true A01: 4281196-4292675 Brassica rapa FPsc
Brara.A00846 10.0kb upstream 10.0kb upstream 10000 false A01: 4282676-4292675 Brassica rapa FPsc
Brara.A00846 10.0kb downstream 10.0kb downstream 11480 true A01: 4271196-4282675 Brassica rapa FPsc
Brara.A00846 10.0kb downstream 10.0kb downstream 10000 false A01: 4271196-4281195 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121525283 5273 Angiosperm View MSA
122352980 5261 Brassicaceae Singleton cluster - no MSA
123840953 5264 Brassicales-Malvales View MSA
124322808 5266 SBM View MSA
124169231 5268 Malvidae View MSA
123892311 5270 Rosid View MSA
123474472 5271 Pentapetalae View MSA
122509745 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier