Gene : Brara.F02497 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  2497
Name:  ? Brara.F02497 Secondary Identifier:  ? PAC:30631692
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02497 0.5kb upstream 0.5kb upstream 4765 true A06: 20871995-20876759 Brassica rapa FPsc
Brara.F02497 0.5kb upstream 0.5kb upstream 500 false A06: 20871995-20872494 Brassica rapa FPsc
Brara.F02497 0.5kb downstream 0.5kb downstream 4765 true A06: 20872495-20877259 Brassica rapa FPsc
Brara.F02497 0.5kb downstream 0.5kb downstream 500 false A06: 20876760-20877259 Brassica rapa FPsc
Brara.F02497 1.0kb upstream 1.0kb upstream 5265 true A06: 20871495-20876759 Brassica rapa FPsc
Brara.F02497 1.0kb upstream 1.0kb upstream 1000 false A06: 20871495-20872494 Brassica rapa FPsc
Brara.F02497 1.0kb downstream 1.0kb downstream 5265 true A06: 20872495-20877759 Brassica rapa FPsc
Brara.F02497 1.0kb downstream 1.0kb downstream 1000 false A06: 20876760-20877759 Brassica rapa FPsc
Brara.F02497 2.0kb upstream 2.0kb upstream 6265 true A06: 20870495-20876759 Brassica rapa FPsc
Brara.F02497 2.0kb upstream 2.0kb upstream 2000 false A06: 20870495-20872494 Brassica rapa FPsc
Brara.F02497 2.0kb downstream 2.0kb downstream 6265 true A06: 20872495-20878759 Brassica rapa FPsc
Brara.F02497 2.0kb downstream 2.0kb downstream 2000 false A06: 20876760-20878759 Brassica rapa FPsc
Brara.F02497 5.0kb upstream 5.0kb upstream 9265 true A06: 20867495-20876759 Brassica rapa FPsc
Brara.F02497 5.0kb upstream 5.0kb upstream 5000 false A06: 20867495-20872494 Brassica rapa FPsc
Brara.F02497 5.0kb downstream 5.0kb downstream 9265 true A06: 20872495-20881759 Brassica rapa FPsc
Brara.F02497 5.0kb downstream 5.0kb downstream 5000 false A06: 20876760-20881759 Brassica rapa FPsc
Brara.F02497 10.0kb upstream 10.0kb upstream 14265 true A06: 20862495-20876759 Brassica rapa FPsc
Brara.F02497 10.0kb upstream 10.0kb upstream 10000 false A06: 20862495-20872494 Brassica rapa FPsc
Brara.F02497 10.0kb downstream 10.0kb downstream 14265 true A06: 20872495-20886759 Brassica rapa FPsc
Brara.F02497 10.0kb downstream 10.0kb downstream 10000 false A06: 20876760-20886759 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360488 5261 Brassicaceae View MSA
123797962 5264 Brassicales-Malvales View MSA
124295657 5266 SBM View MSA
124254053 5268 Malvidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier