Gene : Brara.A01622 B. rapa FPsc v1.3
Defline:  (1 of 3) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase Genomic Order:  1622
Name:  ? Brara.A01622 Secondary Identifier:  ? PAC:30639299
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01622 0.5kb upstream 0.5kb upstream 5409 true A01: 9072394-9077802 Brassica rapa FPsc
Brara.A01622 0.5kb upstream 0.5kb upstream 500 false A01: 9077303-9077802 Brassica rapa FPsc
Brara.A01622 0.5kb downstream 0.5kb downstream 5409 true A01: 9071894-9077302 Brassica rapa FPsc
Brara.A01622 0.5kb downstream 0.5kb downstream 500 false A01: 9071894-9072393 Brassica rapa FPsc
Brara.A01622 1.0kb upstream 1.0kb upstream 5909 true A01: 9072394-9078302 Brassica rapa FPsc
Brara.A01622 1.0kb upstream 1.0kb upstream 1000 false A01: 9077303-9078302 Brassica rapa FPsc
Brara.A01622 1.0kb downstream 1.0kb downstream 5909 true A01: 9071394-9077302 Brassica rapa FPsc
Brara.A01622 1.0kb downstream 1.0kb downstream 1000 false A01: 9071394-9072393 Brassica rapa FPsc
Brara.A01622 2.0kb upstream 2.0kb upstream 6909 true A01: 9072394-9079302 Brassica rapa FPsc
Brara.A01622 2.0kb upstream 2.0kb upstream 2000 false A01: 9077303-9079302 Brassica rapa FPsc
Brara.A01622 2.0kb downstream 2.0kb downstream 6909 true A01: 9070394-9077302 Brassica rapa FPsc
Brara.A01622 2.0kb downstream 2.0kb downstream 2000 false A01: 9070394-9072393 Brassica rapa FPsc
Brara.A01622 5.0kb upstream 5.0kb upstream 9909 true A01: 9072394-9082302 Brassica rapa FPsc
Brara.A01622 5.0kb upstream 5.0kb upstream 5000 false A01: 9077303-9082302 Brassica rapa FPsc
Brara.A01622 5.0kb downstream 5.0kb downstream 9909 true A01: 9067394-9077302 Brassica rapa FPsc
Brara.A01622 5.0kb downstream 5.0kb downstream 5000 false A01: 9067394-9072393 Brassica rapa FPsc
Brara.A01622 10.0kb upstream 10.0kb upstream 14909 true A01: 9072394-9087302 Brassica rapa FPsc
Brara.A01622 10.0kb upstream 10.0kb upstream 10000 false A01: 9077303-9087302 Brassica rapa FPsc
Brara.A01622 10.0kb downstream 10.0kb downstream 14909 true A01: 9062394-9077302 Brassica rapa FPsc
Brara.A01622 10.0kb downstream 10.0kb downstream 10000 false A01: 9062394-9072393 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381542 5261 Brassicaceae View MSA
123837210 5264 Brassicales-Malvales View MSA
124337700 5266 SBM View MSA
124238574 5268 Malvidae View MSA
124068746 5270 Rosid View MSA
123739648 5271 Pentapetalae View MSA
122789806 5272 Eudicot View MSA
122042876 5273 Angiosperm View MSA
121345157 5274 Embryophyte View MSA
123426289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier