Gene : Brara.F02388 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR22904:SF358 - CC-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  2388
Name:  ? Brara.F02388 Secondary Identifier:  ? PAC:30628301
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02388 0.5kb upstream 0.5kb upstream 3128 true A06: 19989505-19992632 Brassica rapa FPsc
Brara.F02388 0.5kb upstream 0.5kb upstream 500 false A06: 19992133-19992632 Brassica rapa FPsc
Brara.F02388 0.5kb downstream 0.5kb downstream 3128 true A06: 19989005-19992132 Brassica rapa FPsc
Brara.F02388 0.5kb downstream 0.5kb downstream 500 false A06: 19989005-19989504 Brassica rapa FPsc
Brara.F02388 1.0kb upstream 1.0kb upstream 3628 true A06: 19989505-19993132 Brassica rapa FPsc
Brara.F02388 1.0kb upstream 1.0kb upstream 1000 false A06: 19992133-19993132 Brassica rapa FPsc
Brara.F02388 1.0kb downstream 1.0kb downstream 3628 true A06: 19988505-19992132 Brassica rapa FPsc
Brara.F02388 1.0kb downstream 1.0kb downstream 1000 false A06: 19988505-19989504 Brassica rapa FPsc
Brara.F02388 2.0kb upstream 2.0kb upstream 4628 true A06: 19989505-19994132 Brassica rapa FPsc
Brara.F02388 2.0kb upstream 2.0kb upstream 2000 false A06: 19992133-19994132 Brassica rapa FPsc
Brara.F02388 2.0kb downstream 2.0kb downstream 4628 true A06: 19987505-19992132 Brassica rapa FPsc
Brara.F02388 2.0kb downstream 2.0kb downstream 2000 false A06: 19987505-19989504 Brassica rapa FPsc
Brara.F02388 5.0kb upstream 5.0kb upstream 7628 true A06: 19989505-19997132 Brassica rapa FPsc
Brara.F02388 5.0kb upstream 5.0kb upstream 5000 false A06: 19992133-19997132 Brassica rapa FPsc
Brara.F02388 5.0kb downstream 5.0kb downstream 7628 true A06: 19984505-19992132 Brassica rapa FPsc
Brara.F02388 5.0kb downstream 5.0kb downstream 5000 false A06: 19984505-19989504 Brassica rapa FPsc
Brara.F02388 10.0kb upstream 10.0kb upstream 12628 true A06: 19989505-20002132 Brassica rapa FPsc
Brara.F02388 10.0kb upstream 10.0kb upstream 10000 false A06: 19992133-20002132 Brassica rapa FPsc
Brara.F02388 10.0kb downstream 10.0kb downstream 12628 true A06: 19979505-19992132 Brassica rapa FPsc
Brara.F02388 10.0kb downstream 10.0kb downstream 10000 false A06: 19979505-19989504 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364740 5261 Brassicaceae View MSA
123838346 5264 Brassicales-Malvales View MSA
124343835 5266 SBM View MSA
124254049 5268 Malvidae View MSA
124063288 5270 Rosid View MSA
123737789 5271 Pentapetalae View MSA
122790297 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier