Gene : Brara.A01449 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10966 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 Genomic Order:  1449
Name:  ? Brara.A01449 Secondary Identifier:  ? PAC:30640461
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01449 0.5kb upstream 0.5kb upstream 2243 true A01: 8005651-8007893 Brassica rapa FPsc
Brara.A01449 0.5kb upstream 0.5kb upstream 500 false A01: 8005651-8006150 Brassica rapa FPsc
Brara.A01449 0.5kb downstream 0.5kb downstream 2243 true A01: 8006151-8008393 Brassica rapa FPsc
Brara.A01449 0.5kb downstream 0.5kb downstream 500 false A01: 8007894-8008393 Brassica rapa FPsc
Brara.A01449 1.0kb upstream 1.0kb upstream 2743 true A01: 8005151-8007893 Brassica rapa FPsc
Brara.A01449 1.0kb upstream 1.0kb upstream 1000 false A01: 8005151-8006150 Brassica rapa FPsc
Brara.A01449 1.0kb downstream 1.0kb downstream 2743 true A01: 8006151-8008893 Brassica rapa FPsc
Brara.A01449 1.0kb downstream 1.0kb downstream 1000 false A01: 8007894-8008893 Brassica rapa FPsc
Brara.A01449 2.0kb upstream 2.0kb upstream 3743 true A01: 8004151-8007893 Brassica rapa FPsc
Brara.A01449 2.0kb upstream 2.0kb upstream 2000 false A01: 8004151-8006150 Brassica rapa FPsc
Brara.A01449 2.0kb downstream 2.0kb downstream 3743 true A01: 8006151-8009893 Brassica rapa FPsc
Brara.A01449 2.0kb downstream 2.0kb downstream 2000 false A01: 8007894-8009893 Brassica rapa FPsc
Brara.A01449 5.0kb upstream 5.0kb upstream 6743 true A01: 8001151-8007893 Brassica rapa FPsc
Brara.A01449 5.0kb upstream 5.0kb upstream 5000 false A01: 8001151-8006150 Brassica rapa FPsc
Brara.A01449 5.0kb downstream 5.0kb downstream 6743 true A01: 8006151-8012893 Brassica rapa FPsc
Brara.A01449 5.0kb downstream 5.0kb downstream 5000 false A01: 8007894-8012893 Brassica rapa FPsc
Brara.A01449 10.0kb upstream 10.0kb upstream 11743 true A01: 7996151-8007893 Brassica rapa FPsc
Brara.A01449 10.0kb upstream 10.0kb upstream 10000 false A01: 7996151-8006150 Brassica rapa FPsc
Brara.A01449 10.0kb downstream 10.0kb downstream 11743 true A01: 8006151-8017893 Brassica rapa FPsc
Brara.A01449 10.0kb downstream 10.0kb downstream 10000 false A01: 8007894-8017893 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364167 5261 Brassicaceae View MSA
123839671 5264 Brassicales-Malvales View MSA
124342942 5266 SBM View MSA
124244097 5268 Malvidae View MSA
124060415 5270 Rosid View MSA
123747373 5271 Pentapetalae View MSA
122787968 5272 Eudicot View MSA
122045425 5273 Angiosperm View MSA
121349813 5274 Embryophyte View MSA
123423825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier