Gene : Brara.D00639 B. rapa FPsc v1.3
Defline:  (1 of 12) PF05514 - HR-like lesion-inducing (HR_lesion) Genomic Order:  639
Name:  ? Brara.D00639 Secondary Identifier:  ? PAC:30620752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00639 0.5kb upstream 0.5kb upstream 1926 true A04: 5015345-5017270 Brassica rapa FPsc
Brara.D00639 0.5kb upstream 0.5kb upstream 500 false A04: 5015345-5015844 Brassica rapa FPsc
Brara.D00639 0.5kb downstream 0.5kb downstream 1926 true A04: 5015845-5017770 Brassica rapa FPsc
Brara.D00639 0.5kb downstream 0.5kb downstream 500 false A04: 5017271-5017770 Brassica rapa FPsc
Brara.D00639 1.0kb upstream 1.0kb upstream 2426 true A04: 5014845-5017270 Brassica rapa FPsc
Brara.D00639 1.0kb upstream 1.0kb upstream 1000 false A04: 5014845-5015844 Brassica rapa FPsc
Brara.D00639 1.0kb downstream 1.0kb downstream 2426 true A04: 5015845-5018270 Brassica rapa FPsc
Brara.D00639 1.0kb downstream 1.0kb downstream 1000 false A04: 5017271-5018270 Brassica rapa FPsc
Brara.D00639 2.0kb upstream 2.0kb upstream 3426 true A04: 5013845-5017270 Brassica rapa FPsc
Brara.D00639 2.0kb upstream 2.0kb upstream 2000 false A04: 5013845-5015844 Brassica rapa FPsc
Brara.D00639 2.0kb downstream 2.0kb downstream 3426 true A04: 5015845-5019270 Brassica rapa FPsc
Brara.D00639 2.0kb downstream 2.0kb downstream 2000 false A04: 5017271-5019270 Brassica rapa FPsc
Brara.D00639 5.0kb upstream 5.0kb upstream 6426 true A04: 5010845-5017270 Brassica rapa FPsc
Brara.D00639 5.0kb upstream 5.0kb upstream 5000 false A04: 5010845-5015844 Brassica rapa FPsc
Brara.D00639 5.0kb downstream 5.0kb downstream 6426 true A04: 5015845-5022270 Brassica rapa FPsc
Brara.D00639 5.0kb downstream 5.0kb downstream 5000 false A04: 5017271-5022270 Brassica rapa FPsc
Brara.D00639 10.0kb upstream 10.0kb upstream 11426 true A04: 5005845-5017270 Brassica rapa FPsc
Brara.D00639 10.0kb upstream 10.0kb upstream 10000 false A04: 5005845-5015844 Brassica rapa FPsc
Brara.D00639 10.0kb downstream 10.0kb downstream 11426 true A04: 5015845-5027270 Brassica rapa FPsc
Brara.D00639 10.0kb downstream 10.0kb downstream 10000 false A04: 5017271-5027270 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348434 5261 Brassicaceae Singleton cluster - no MSA
123787778 5264 Brassicales-Malvales Singleton cluster - no MSA
124285834 5266 SBM Singleton cluster - no MSA
124256159 5268 Malvidae View MSA
123953447 5270 Rosid View MSA
123530811 5271 Pentapetalae View MSA
122565750 5272 Eudicot View MSA
122050658 5273 Angiosperm View MSA
121351347 5274 Embryophyte View MSA
123426506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier