Gene : Brara.D00671 B. rapa FPsc v1.3
Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  671
Name:  ? Brara.D00671 Secondary Identifier:  ? PAC:30620147
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6622 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00671 0.5kb upstream 0.5kb upstream 5383 true A04: 5360512-5365894 Brassica rapa FPsc
Brara.D00671 0.5kb upstream 0.5kb upstream 500 false A04: 5360512-5361011 Brassica rapa FPsc
Brara.D00671 0.5kb downstream 0.5kb downstream 5383 true A04: 5361012-5366394 Brassica rapa FPsc
Brara.D00671 0.5kb downstream 0.5kb downstream 500 false A04: 5365895-5366394 Brassica rapa FPsc
Brara.D00671 1.0kb upstream 1.0kb upstream 5883 true A04: 5360012-5365894 Brassica rapa FPsc
Brara.D00671 1.0kb upstream 1.0kb upstream 1000 false A04: 5360012-5361011 Brassica rapa FPsc
Brara.D00671 1.0kb downstream 1.0kb downstream 5883 true A04: 5361012-5366894 Brassica rapa FPsc
Brara.D00671 1.0kb downstream 1.0kb downstream 1000 false A04: 5365895-5366894 Brassica rapa FPsc
Brara.D00671 2.0kb upstream 2.0kb upstream 6883 true A04: 5359012-5365894 Brassica rapa FPsc
Brara.D00671 2.0kb upstream 2.0kb upstream 2000 false A04: 5359012-5361011 Brassica rapa FPsc
Brara.D00671 2.0kb downstream 2.0kb downstream 6883 true A04: 5361012-5367894 Brassica rapa FPsc
Brara.D00671 2.0kb downstream 2.0kb downstream 2000 false A04: 5365895-5367894 Brassica rapa FPsc
Brara.D00671 5.0kb upstream 5.0kb upstream 9883 true A04: 5356012-5365894 Brassica rapa FPsc
Brara.D00671 5.0kb upstream 5.0kb upstream 5000 false A04: 5356012-5361011 Brassica rapa FPsc
Brara.D00671 5.0kb downstream 5.0kb downstream 9883 true A04: 5361012-5370894 Brassica rapa FPsc
Brara.D00671 5.0kb downstream 5.0kb downstream 5000 false A04: 5365895-5370894 Brassica rapa FPsc
Brara.D00671 10.0kb upstream 10.0kb upstream 14883 true A04: 5351012-5365894 Brassica rapa FPsc
Brara.D00671 10.0kb upstream 10.0kb upstream 10000 false A04: 5351012-5361011 Brassica rapa FPsc
Brara.D00671 10.0kb downstream 10.0kb downstream 14883 true A04: 5361012-5375894 Brassica rapa FPsc
Brara.D00671 10.0kb downstream 10.0kb downstream 10000 false A04: 5365895-5375894 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372411 5261 Brassicaceae View MSA
123800358 5264 Brassicales-Malvales View MSA
124297775 5266 SBM View MSA
124149578 5268 Malvidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier