Gene : Brara.A01534 B. rapa FPsc v1.3
Defline:  (1 of 9) PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1534
Name:  ? Brara.A01534 Secondary Identifier:  ? PAC:30637792
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01534 0.5kb upstream 0.5kb upstream 2607 true A01: 8500269-8502875 Brassica rapa FPsc
Brara.A01534 0.5kb upstream 0.5kb upstream 500 false A01: 8500269-8500768 Brassica rapa FPsc
Brara.A01534 0.5kb downstream 0.5kb downstream 2607 true A01: 8500769-8503375 Brassica rapa FPsc
Brara.A01534 0.5kb downstream 0.5kb downstream 500 false A01: 8502876-8503375 Brassica rapa FPsc
Brara.A01534 1.0kb upstream 1.0kb upstream 3107 true A01: 8499769-8502875 Brassica rapa FPsc
Brara.A01534 1.0kb upstream 1.0kb upstream 1000 false A01: 8499769-8500768 Brassica rapa FPsc
Brara.A01534 1.0kb downstream 1.0kb downstream 3107 true A01: 8500769-8503875 Brassica rapa FPsc
Brara.A01534 1.0kb downstream 1.0kb downstream 1000 false A01: 8502876-8503875 Brassica rapa FPsc
Brara.A01534 2.0kb upstream 2.0kb upstream 4107 true A01: 8498769-8502875 Brassica rapa FPsc
Brara.A01534 2.0kb upstream 2.0kb upstream 2000 false A01: 8498769-8500768 Brassica rapa FPsc
Brara.A01534 2.0kb downstream 2.0kb downstream 4107 true A01: 8500769-8504875 Brassica rapa FPsc
Brara.A01534 2.0kb downstream 2.0kb downstream 2000 false A01: 8502876-8504875 Brassica rapa FPsc
Brara.A01534 5.0kb upstream 5.0kb upstream 7107 true A01: 8495769-8502875 Brassica rapa FPsc
Brara.A01534 5.0kb upstream 5.0kb upstream 5000 false A01: 8495769-8500768 Brassica rapa FPsc
Brara.A01534 5.0kb downstream 5.0kb downstream 7107 true A01: 8500769-8507875 Brassica rapa FPsc
Brara.A01534 5.0kb downstream 5.0kb downstream 5000 false A01: 8502876-8507875 Brassica rapa FPsc
Brara.A01534 10.0kb upstream 10.0kb upstream 12107 true A01: 8490769-8502875 Brassica rapa FPsc
Brara.A01534 10.0kb upstream 10.0kb upstream 10000 false A01: 8490769-8500768 Brassica rapa FPsc
Brara.A01534 10.0kb downstream 10.0kb downstream 12107 true A01: 8500769-8512875 Brassica rapa FPsc
Brara.A01534 10.0kb downstream 10.0kb downstream 10000 false A01: 8502876-8512875 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352500 5261 Brassicaceae Singleton cluster - no MSA
123791224 5264 Brassicales-Malvales Singleton cluster - no MSA
124289145 5266 SBM Singleton cluster - no MSA
124251241 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier