Gene : Brara.F02045 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Genomic Order:  2045
Name:  ? Brara.F02045 Secondary Identifier:  ? PAC:30628248
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5980 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02045 0.5kb upstream 0.5kb upstream 2823 true A06: 17070435-17073257 Brassica rapa FPsc
Brara.F02045 0.5kb upstream 0.5kb upstream 500 false A06: 17070435-17070934 Brassica rapa FPsc
Brara.F02045 0.5kb downstream 0.5kb downstream 2823 true A06: 17070935-17073757 Brassica rapa FPsc
Brara.F02045 0.5kb downstream 0.5kb downstream 500 false A06: 17073258-17073757 Brassica rapa FPsc
Brara.F02045 1.0kb upstream 1.0kb upstream 3323 true A06: 17069935-17073257 Brassica rapa FPsc
Brara.F02045 1.0kb upstream 1.0kb upstream 1000 false A06: 17069935-17070934 Brassica rapa FPsc
Brara.F02045 1.0kb downstream 1.0kb downstream 3323 true A06: 17070935-17074257 Brassica rapa FPsc
Brara.F02045 1.0kb downstream 1.0kb downstream 1000 false A06: 17073258-17074257 Brassica rapa FPsc
Brara.F02045 2.0kb upstream 2.0kb upstream 4323 true A06: 17068935-17073257 Brassica rapa FPsc
Brara.F02045 2.0kb upstream 2.0kb upstream 2000 false A06: 17068935-17070934 Brassica rapa FPsc
Brara.F02045 2.0kb downstream 2.0kb downstream 4323 true A06: 17070935-17075257 Brassica rapa FPsc
Brara.F02045 2.0kb downstream 2.0kb downstream 2000 false A06: 17073258-17075257 Brassica rapa FPsc
Brara.F02045 5.0kb upstream 5.0kb upstream 7323 true A06: 17065935-17073257 Brassica rapa FPsc
Brara.F02045 5.0kb upstream 5.0kb upstream 5000 false A06: 17065935-17070934 Brassica rapa FPsc
Brara.F02045 5.0kb downstream 5.0kb downstream 7323 true A06: 17070935-17078257 Brassica rapa FPsc
Brara.F02045 5.0kb downstream 5.0kb downstream 5000 false A06: 17073258-17078257 Brassica rapa FPsc
Brara.F02045 10.0kb upstream 10.0kb upstream 12323 true A06: 17060935-17073257 Brassica rapa FPsc
Brara.F02045 10.0kb upstream 10.0kb upstream 10000 false A06: 17060935-17070934 Brassica rapa FPsc
Brara.F02045 10.0kb downstream 10.0kb downstream 12323 true A06: 17070935-17083257 Brassica rapa FPsc
Brara.F02045 10.0kb downstream 10.0kb downstream 10000 false A06: 17073258-17083257 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361554 5261 Brassicaceae View MSA
123831717 5264 Brassicales-Malvales View MSA
124343729 5266 SBM View MSA
124242312 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier